RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RMDN3Q96TC7 470 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 TMEM47Q9BQJ4 181 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 RC3H2Q9HBD1 1191 aaKnown RBP14.75□□□□□ -0.05
SCAF1-202ENST00000595242 COL20A1Q9P218 1284 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
SCAF1-202ENST00000595242 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 ZMYM6O95789 1325 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 TPRP12270 2363 aaKnown RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 EPG5Q9HCE0 2579 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 FOXP2O15409 715 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 EIF3JO75822 258 aaKnown RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 HMGB1P09429 215 aaKnown RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 CPA1P15085 419 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 HOXC8P31273 242 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 GSE1Q14687 1217 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 MYSM1Q5VVJ2 828 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 FRMD5Q7Z6J6 570 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 ZBTB33Q86T24 672 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 SYTL5Q8TDW5 730 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-202ENST00000595242 P2RX5Q93086 422 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 NEK1Q96PY6 1258 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 C16orf70Q9BSU1 422 aa14.74□□□□□ -0.05
SCAF1-202ENST00000595242 KMT2BQ9UMN6 2715 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-202ENST00000595242 FRYLO94915 3013 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 SORBS3O60504 671 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 LARGE1O95461 756 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 ITGB1P05556 798 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 PDHBP11177 359 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 ATF7P17544 494 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-202ENST00000595242 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
SCAF1-202ENST00000595242 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 PKP1Q13835 747 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-202ENST00000595242 TMEM105Q8N8V8 129 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 SPPL3Q8TCT6 385 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 ZNF689Q96CS4 500 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-202ENST00000595242 SPATA33Q96N06 139 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 AGXT2Q9BYV1 514 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 MAF1Q9H063 256 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 RNPEPQ9H4A4 650 aa14.73□□□□□ -0.05
SCAF1-202ENST00000595242 MED19A0JLT2 244 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 H3BRB1 525 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 EIF2AK2P19525 551 aaKnown RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 SKOR2Q2VWA4 1001 aaPredicted RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 CELF3Q5SZQ8 465 aaKnown RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 ARHGEF16Q5VV41 709 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 STOX1Q6ZVD7 989 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 FBXL16Q8N461 479 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 SUSD6Q92537 303 aa14.72□□□□□ -0.05
SCAF1-202ENST00000595242 TUT1Q9H6E5 874 aaKnown RBP14.72□□□□□ -0.05
SCAF1-202ENST00000595242 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 ENPP3O14638 875 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 TRAK2O60296 914 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 DGKIO75912 1065 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 KRT37O76014 449 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 NR3C2P08235 984 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 COL9A3Q14050 684 aaPredicted RBP14.71□□□□□ -0.05
SCAF1-202ENST00000595242 ME3Q16798 604 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 FAM26DQ5JW98 314 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 MCTP2Q6DN12 878 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 KLHL23Q8NBE8 558 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 POF1BQ8WVV4 589 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 TLE6Q9H808 572 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 MRPL42Q9Y6G3 142 aaKnown RBP14.71□□□□□ -0.05
SCAF1-202ENST00000595242 CACNA1GO43497 2377 aa14.71□□□□□ -0.05
SCAF1-202ENST00000595242 FNDC1Q4ZHG4 1894 aaPredicted RBP14.71□□□□□ -0.05
SCAF1-202ENST00000595242 ABCB11O95342 1321 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 GGPS1O95749 300 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 RBM10P98175 930 aaKnown RBP14.7□□□□□ -0.06
SCAF1-202ENST00000595242 EXOSC10Q01780 885 aaKnown RBP14.7□□□□□ -0.06
SCAF1-202ENST00000595242 MCF2L2Q86YR7 1114 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 PXMP2Q9NR77 195 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 SETD4Q9NVD3 440 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
SCAF1-202ENST00000595242 NCOR2Q9Y618 2525 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 E7EWF7 191 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 PER2O15055 1255 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 ORC4O43929 436 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 CHRNA1P02708 482 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 SP100P23497 879 aaPredicted RBP14.69□□□□□ -0.06
SCAF1-202ENST00000595242 ALX1Q15699 326 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 KCNV1Q6PIU1 500 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
SCAF1-202ENST00000595242 KREMEN2Q8NCW0 462 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 CPVLQ9H3G5 476 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 TOMM22Q9NS69 142 aa14.69□□□□□ -0.06
SCAF1-202ENST00000595242 LGALS2P05162 132 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 FGRP09769 529 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 GOLGA8HP0CJ92 632 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 SNHG28P0DPA3 235 aa14.68□□□□□ -0.06
SCAF1-202ENST00000595242 GHRP10912 638 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms