RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TBC1D22BQ9NU19 505 aa17.35■□□□□ 0.37
TRIM28-203ENST00000593582 TUBE1Q9UJT0 475 aa17.35■□□□□ 0.37
TRIM28-203ENST00000593582 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
TRIM28-203ENST00000593582 PCDHA4Q9UN74 947 aa17.35■□□□□ 0.37
TRIM28-203ENST00000593582 TRPC6Q9Y210 931 aa17.35■□□□□ 0.37
TRIM28-203ENST00000593582 RRN3P2A6NIE6 340 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 BACH1O14867 736 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 PFKFB2O60825 505 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 ATG7O95352 703 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 MYOGP15173 224 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 CIITAP33076 1130 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 SLC26A2P50443 739 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 STAT5BP51692 787 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 PRR16Q569H4 304 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 RSPH3Q86UC2 560 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 MAFAQ8NHW3 353 aaPredicted RBP17.34■□□□□ 0.37
TRIM28-203ENST00000593582 IL17RAQ96F46 866 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 TCEAL9Q9UHQ7 104 aa17.34■□□□□ 0.37
TRIM28-203ENST00000593582 PRUNE2Q8WUY3 3088 aa17.33■□□□□ 0.37
TRIM28-203ENST00000593582 CHD7Q9P2D1 2997 aa17.33■□□□□ 0.37
TRIM28-203ENST00000593582 DHX15O43143 795 aaKnown RBP17.33■□□□□ 0.36
TRIM28-203ENST00000593582 CCNE2O96020 404 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 INSRRP14616 1297 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 USP11P51784 963 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 AK2P54819 239 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 IGBP1P78318 339 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 FAM160B1Q5W0V3 765 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 RPAINQ86UA6 219 aa17.33■□□□□ 0.36
TRIM28-203ENST00000593582 GAS2L1Q99501 681 aaPredicted RBP17.33■□□□□ 0.36
TRIM28-203ENST00000593582 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-203ENST00000593582 TLL1O43897 1013 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 RPLP2P05387 115 aaKnown RBP17.32■□□□□ 0.36
TRIM28-203ENST00000593582 CA3P07451 260 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 XBP1P17861 261 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 PLCB4Q15147 1175 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 MARCH8Q5T0T0 291 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
TRIM28-203ENST00000593582 MIS18BP1Q6P0N0 1132 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 BLIDQ8IZY5 108 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 DBF4BQ8NFT6 615 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 TBCKQ8TEA7 893 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 SEPT8Q92599 483 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 AIFM3Q96NN9 605 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 UIMC1Q96RL1 719 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
TRIM28-203ENST00000593582 STK36Q9NRP7 1315 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 IGKV6D-21A0A0A0MT36 114 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 SEC24BO95487 1268 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 NEK4P51957 841 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 DEFB103AP81534 67 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 KRT76Q01546 638 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 FAM26DQ5JW98 314 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 SMAP1Q8IYB5 467 aaPredicted RBP17.31■□□□□ 0.36
TRIM28-203ENST00000593582 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 LENG9Q96B70 501 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 ZNF302Q9NR11 478 aa17.31■□□□□ 0.36
TRIM28-203ENST00000593582 SWSAP1Q6NVH7 229 aa17.3■□□□□ 0.36
TRIM28-203ENST00000593582 PDXDC2PQ6P474 469 aa17.3■□□□□ 0.36
TRIM28-203ENST00000593582 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
TRIM28-203ENST00000593582 ATP8B4Q8TF62 1192 aa17.3■□□□□ 0.36
TRIM28-203ENST00000593582 DNAJB3Q8WWF6 145 aa17.3■□□□□ 0.36
TRIM28-203ENST00000593582 APBB2Q92870 758 aa17.3■□□□□ 0.36
TRIM28-203ENST00000593582 M0R2N6 131 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 HBP1O60381 514 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 GJB5O95377 273 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 CHRNA1P02708 482 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 AMHP03971 560 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 PSAPP07602 524 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
TRIM28-203ENST00000593582 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 WASF1Q92558 559 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 RAD9AQ99638 391 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
TRIM28-203ENST00000593582 FAM49AQ9H0Q0 323 aaPredicted RBP17.29■□□□□ 0.36
TRIM28-203ENST00000593582 KCNJ14Q9UNX9 436 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 PCDHA10Q9Y5I2 948 aa17.29■□□□□ 0.36
TRIM28-203ENST00000593582 MSH4O15457 936 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 EDIL3O43854 480 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIM28-203ENST00000593582 NPY5RQ15761 445 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 ME3Q16798 604 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 IER5Q5VY09 327 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIM28-203ENST00000593582 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 TRAPPC12Q8WVT3 735 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 ZBTB10Q96DT7 871 aa17.28■□□□□ 0.36
TRIM28-203ENST00000593582 RIT2Q99578 217 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms