RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
MBD1-218ENST00000589541 KHSRPQ92945 711 aaKnown RBP eCLIP13.5□□□□□ -0.25
MBD1-218ENST00000589541 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 PCYT2Q99447 389 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 AZI2Q9H6S1 392 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 SLC9A2Q9UBY0 812 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
MBD1-218ENST00000589541 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
MBD1-218ENST00000589541 RRN3P2A6NIE6 340 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
MBD1-218ENST00000589541 ENPP3O14638 875 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 ZBTB43O43298 467 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 ARP10275 920 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 ADCY7P51828 1080 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 ACTR2P61160 394 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
MBD1-218ENST00000589541 RTN1Q16799 776 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 TCEAL5Q5H9L2 206 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
MBD1-218ENST00000589541 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 AGO3Q9H9G7 860 aaKnown RBP13.49□□□□□ -0.25
MBD1-218ENST00000589541 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
MBD1-218ENST00000589541 COL4A6Q14031 1691 aa13.49□□□□□ -0.25
MBD1-218ENST00000589541 ADGRA3Q8IWK6 1321 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 STXBP3O00186 592 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 IL9P15248 144 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 CD52P31358 61 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
MBD1-218ENST00000589541 TMEM62Q0P6H9 643 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 FUT2Q10981 343 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
MBD1-218ENST00000589541 ADCK5Q3MIX3 580 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 CEP55Q53EZ4 464 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 IER5Q5VY09 327 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
MBD1-218ENST00000589541 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 LRFN3Q9BTN0 628 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 NSUN3Q9H649 340 aaKnown RBP13.48□□□□□ -0.25
MBD1-218ENST00000589541 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
MBD1-218ENST00000589541 NFASCO94856 1347 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 LINC00271P0C7V0 271 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 BMPR1AP36894 532 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 STAT5BP51692 787 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 PLCB4Q15147 1175 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 TMEM31Q5JXX7 168 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 GJD3Q8N144 294 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 TNPO1Q92973 898 aaKnown RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 C11orf84Q9BUA3 381 aaPredicted RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 AGO4Q9HCK5 861 aaKnown RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 BARHL2Q9NY43 387 aa13.47□□□□□ -0.25
MBD1-218ENST00000589541 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
MBD1-218ENST00000589541 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 M0QZ92 97 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 DDX39AO00148 427 aaKnown RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 MEIS1O00470 390 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 GRM6O15303 877 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 DGKIO75912 1065 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 CSPG5O95196 566 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 RPLP2P05387 115 aaKnown RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 RB1P06400 928 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 CDC27P30260 824 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 ZNF76P36508 570 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 SREBF1P36956 1147 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 LINC01599Q8WXQ3 324 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 CLP1Q92989 425 aaKnown RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 PABPC5Q96DU9 382 aaKnown RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 FAM217BQ9NTX9 383 aaPredicted RBP13.46□□□□□ -0.25
MBD1-218ENST00000589541 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 RWDD3Q9Y3V2 267 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 PCDHA2Q9Y5H9 948 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 TRPV2Q9Y5S1 764 aa13.46□□□□□ -0.25
MBD1-218ENST00000589541 KAT6AQ92794 2004 aa13.46□□□□□ -0.26
MBD1-218ENST00000589541 PI4K2BG5E9Z4 385 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms