RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF215Q9UL58 517 aaPredicted RBP21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 TCHHQ07283 1943 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 A0A0U1RQG5 324 aaPredicted RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 FXR2P51116 673 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 STAT5BP51692 787 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 DNM1Q05193 864 aaKnown RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 ITGA7Q13683 1181 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 TMEM266Q2M3C6 531 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 NBPF20Q3BBV1 942 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 FAM160B1Q5W0V3 765 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 SLC39A5Q6ZMH5 540 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 AFAP1L1Q8TED9 768 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 CHAMP1Q96JM3 812 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 GABBR1Q9UBS5 961 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 IGSF9BQ9UPX0 1349 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 NASPP49321 788 aaPredicted RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 LRRC26Q2I0M4 334 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 ARL6IP4Q66PJ3 421 aaKnown RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 DTHD1Q6ZMT9 781 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 PLPPR4Q7Z2D5 763 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 ERAP1Q9NZ08 941 aa21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 CIZ1Q9ULV3 898 aaPredicted RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 MAFBQ9Y5Q3 323 aaPredicted RBP21.34■■□□□ 1.01
CLPTM1-209ENST00000588855 EPHA7Q15375 998 aa21.33■■□□□ 1
CLPTM1-209ENST00000588855 PDXDC2PQ6P474 469 aa21.33■■□□□ 1
CLPTM1-209ENST00000588855 BANK1Q8NDB2 785 aa21.33■■□□□ 1
CLPTM1-209ENST00000588855 KAT6AQ92794 2004 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 VWA3AA6NCI4 1184 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 ARVCFO00192 962 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 ATP4AP20648 1035 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 MARCKSP29966 332 aaPredicted RBP21.32■■□□□ 1
CLPTM1-209ENST00000588855 TRIP12Q14669 1992 aaPredicted RBP21.32■■□□□ 1
CLPTM1-209ENST00000588855 SNX17Q15036 470 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 IGSF22Q8N9C0 903 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 SLC43A3Q8NBI5 491 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 RNPEPQ9H4A4 650 aa21.32■■□□□ 1
CLPTM1-209ENST00000588855 ZNF862O60290 1169 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 CYP4A11Q02928 519 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 SLC39A14Q15043 492 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 PLCB4Q15147 1175 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 STK38Q15208 465 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 TRIM60Q495X7 471 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 FAM47CQ5HY64 1035 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 NFRKBQ6P4R8 1299 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 LINC00301Q8NCQ3 95 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 DYDC2Q96IM9 177 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 EIF2AK1Q9BQI3 630 aaKnown RBP21.31■■□□□ 1
CLPTM1-209ENST00000588855 RGL1Q9NZL6 768 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 HDAC6Q9UBN7 1215 aa21.31■■□□□ 1
CLPTM1-209ENST00000588855 PP2D1A8MPX8 630 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 YEATS4O95619 227 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 SMIM10L2AP0DMW4 78 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 SMIM10L2BP0DMW5 78 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 SLC26A2P50443 739 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 CDK7P50613 346 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 RTP1P59025 263 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 PRKCEQ02156 737 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 GRIN1Q05586 938 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 C1orf53Q5VUE5 145 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 C7orf31Q8N865 590 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 ATP6V0A1Q93050 837 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 LXNQ9BS40 222 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 RAB34Q9BZG1 259 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 WRAP73Q9P2S5 460 aaPredicted RBP21.3■■□□□ 1
CLPTM1-209ENST00000588855 LRWD1Q9UFC0 647 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 ATP6V1DQ9Y5K8 247 aa21.3■■□□□ 1
CLPTM1-209ENST00000588855 TNRC18O15417 2968 aaPredicted RBP21.3■■□□□ 1
CLPTM1-209ENST00000588855 P4HBP07237 508 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 QARSP47897 775 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 CTTNQ14247 550 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 PDIA5Q14554 519 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 ATL3Q6DD88 541 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 TRMT1LQ7Z2T5 733 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 CKAP2LQ8IYA6 745 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 HSD17B14Q9BPX1 270 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 CHMP5Q9NZZ3 219 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 FBXO2Q9UK22 296 aaPredicted RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 TRPC6Q9Y210 931 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 ATP11BQ9Y2G3 1177 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 MORC2Q9Y6X9 1032 aaPredicted RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 ARID2Q68CP9 1835 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 POTEB3A0JP26 581 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 PQBP1O60828 265 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 NCLP19338 710 aaKnown RBP21.29■■□□□ 1
CLPTM1-209ENST00000588855 CDC25AP30304 524 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 PSMC5P62195 406 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 HIC1Q14526 733 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 POTEBQ6S5H4 581 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 SESTD1Q86VW0 696 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 NEK9Q8TD19 979 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 ATP8B4Q8TF62 1192 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 GTF2IRD1Q9UHL9 959 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 CFAP45Q9UL16 551 aa21.29■■□□□ 1
CLPTM1-209ENST00000588855 SPTLC2O15270 562 aa21.28■■□□□ 1
CLPTM1-209ENST00000588855 MED24O75448 989 aa21.28■■□□□ 1
CLPTM1-209ENST00000588855 SLITRK3O94933 977 aa21.28■■□□□ 1
CLPTM1-209ENST00000588855 OATP04181 439 aa21.28■■□□□ 1
CLPTM1-209ENST00000588855 PTPN11Q06124 597 aaPredicted RBP21.28■■□□□ 1
CLPTM1-209ENST00000588855 PPFIA1Q13136 1202 aa21.28■■□□□ 1
CLPTM1-209ENST00000588855 GDF6Q6KF10 455 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms