RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PCYT2Q99447 389 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 GAS2L1Q99501 681 aaPredicted RBP22.21■■□□□ 1.15
TPM4-208ENST00000588410 ZBED2Q9BTP6 218 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 TBC1D22BQ9NU19 505 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 TUBE1Q9UJT0 475 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 TPCN1Q9ULQ1 816 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 PFKFB2O60825 505 aa22.2■■□□□ 1.14
TPM4-208ENST00000588410 AK2P54819 239 aa22.2■■□□□ 1.14
TPM4-208ENST00000588410 MIS18BP1Q6P0N0 1132 aa22.2■■□□□ 1.14
TPM4-208ENST00000588410 FAM177A1Q8N128 213 aaPredicted RBP22.2■■□□□ 1.14
TPM4-208ENST00000588410 SEPT8Q92599 483 aa22.2■■□□□ 1.14
TPM4-208ENST00000588410 PRDM12Q9H4Q4 367 aa22.2■■□□□ 1.14
TPM4-208ENST00000588410 ATG7O95352 703 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 CCNE2O96020 404 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 INSRRP14616 1297 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 XBP1P17861 261 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 CIITAP33076 1130 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 SLC26A2P50443 739 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 PLCB4Q15147 1175 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 GALNT17Q6IS24 598 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 RUFY4Q6ZNE9 571 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 BLIDQ8IZY5 108 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 DBF4BQ8NFT6 615 aa22.19■■□□□ 1.14
TPM4-208ENST00000588410 MYH7BA7E2Y1 1941 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 TLL1O43897 1013 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 CA3P07451 260 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 USP11P51784 963 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 TCTN1Q2MV58 587 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 ABHD15Q6UXT9 468 aa22.18■■□□□ 1.14
TPM4-208ENST00000588410 POTEB3A0JP26 581 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 MBLAC1A4D2B0 266 aaPredicted RBP22.17■■□□□ 1.14
TPM4-208ENST00000588410 DHX15O43143 795 aaKnown RBP22.17■■□□□ 1.14
TPM4-208ENST00000588410 RPLP2P05387 115 aaKnown RBP22.17■■□□□ 1.14
TPM4-208ENST00000588410 DEFB103AP81534 67 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 KRT76Q01546 638 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 PLEKHG4Q58EX7 1191 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 FAM26DQ5JW98 314 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 ZNF746Q6NUN9 644 aaPredicted RBP22.17■■□□□ 1.14
TPM4-208ENST00000588410 POTEBQ6S5H4 581 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 RPAINQ86UA6 219 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 DAGLBQ8NCG7 672 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 TBCKQ8TEA7 893 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 AIFM3Q96NN9 605 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 ZNF302Q9NR11 478 aa22.17■■□□□ 1.14
TPM4-208ENST00000588410 STK36Q9NRP7 1315 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 IGKV6D-21A0A0A0MT36 114 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 AMHP03971 560 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 NEK4P51957 841 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 MARCH8Q5T0T0 291 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 SWSAP1Q6NVH7 229 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 PDXDC2PQ6P474 469 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 SMAP1Q8IYB5 467 aaPredicted RBP22.16■■□□□ 1.14
TPM4-208ENST00000588410 DNAJB3Q8WWF6 145 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 WASF1Q92558 559 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 IL17RAQ96F46 866 aa22.16■■□□□ 1.14
TPM4-208ENST00000588410 LAMA2P24043 3122 aaKnown RBP22.16■■□□□ 1.14
TPM4-208ENST00000588410 SEC24BO95487 1268 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 PSAPP07602 524 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 IGFBP4P22692 258 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 TMCO2Q7Z6W1 182 aaPredicted RBP22.15■■□□□ 1.14
TPM4-208ENST00000588410 CKAP2LQ8IYA6 745 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 APBB2Q92870 758 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 FAM49AQ9H0Q0 323 aaPredicted RBP22.15■■□□□ 1.14
TPM4-208ENST00000588410 KCNJ14Q9UNX9 436 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 SAMM50Q9Y512 469 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 TANC1Q9C0D5 1861 aa22.15■■□□□ 1.14
TPM4-208ENST00000588410 M0QZ92 97 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 HBP1O60381 514 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 CHRNA1P02708 482 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 NONOQ15233 471 aaKnown RBP eCLIP22.14■■□□□ 1.133e-8■■■■■ 34.8
TPM4-208ENST00000588410 FAM117BQ6P1L5 589 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 KRT25Q7Z3Z0 450 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 CCDC60Q8IWA6 550 aaPredicted RBP22.14■■□□□ 1.13
TPM4-208ENST00000588410 ATP8B4Q8TF62 1192 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 TRAPPC12Q8WVT3 735 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 ORC3Q9UBD5 711 aaPredicted RBP22.14■■□□□ 1.13
TPM4-208ENST00000588410 PCDHA10Q9Y5I2 948 aa22.14■■□□□ 1.13
TPM4-208ENST00000588410 MSH4O15457 936 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 GAS7O60861 476 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 GJB5O95377 273 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 GHRP10912 638 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 IER5Q5VY09 327 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.13■■□□□ 1.136e-8■□□□□ 9.1
TPM4-208ENST00000588410 MYOCDQ8IZQ8 938 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 NECAB1Q8N987 351 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 LENG9Q96B70 501 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 ZBTB10Q96DT7 871 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 RIT2Q99578 217 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 RAD9AQ99638 391 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 PHF20Q9BVI0 1012 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 IFIH1Q9BYX4 1025 aaKnown RBP22.13■■□□□ 1.13
TPM4-208ENST00000588410 PCDHA2Q9Y5H9 948 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 SCN5AQ14524 2016 aa22.13■■□□□ 1.13
TPM4-208ENST00000588410 CCDC194A0A1B0GVG4 234 aa22.12■■□□□ 1.13
TPM4-208ENST00000588410 WDR64B1ANS9 1081 aa22.12■■□□□ 1.13
TPM4-208ENST00000588410 MRPS6P82932 125 aaKnown RBP22.12■■□□□ 1.13
TPM4-208ENST00000588410 ME3Q16798 604 aa22.12■■□□□ 1.13
TPM4-208ENST00000588410 ZNF484Q5JVG2 852 aa22.12■■□□□ 1.13
TPM4-208ENST00000588410 MTHFD1LQ6UB35 978 aa22.12■■□□□ 1.13
TPM4-208ENST00000588410 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.12■■□□□ 1.132e-6■■■■■ 40.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms