RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SNAP25P60880 206 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 HSP90B2PQ58FF3 399 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 MAB21L3Q8N8X9 362 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 NLGN2Q8NFZ4 835 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 PLIN2Q99541 437 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 PARD6BQ9BYG5 372 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 PDE11AQ9HCR9 933 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SAMSN1Q9NSI8 373 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 BLOC1S4Q9NUP1 217 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 FAN1Q9Y2M0 1017 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 BICDL2A1A5D9 508 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 ERLIN1O75477 346 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 AP1G2O75843 785 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 PRCPP42785 496 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 GHRHRQ02643 423 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 E4F1Q66K89 784 aaPredicted RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 CDCA2Q69YH5 1023 aaPredicted RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SPATS2Q86XZ4 545 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 CCDC50Q8IVM0 306 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 WDR18Q9BV38 432 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 LIMA1Q9UHB6 759 aaKnown RBP10.62□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 MYO6Q9UM54 1294 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 GDAQ9Y2T3 454 aa10.62□□□□□ -0.71
LINC01539-201ENST00000587904 LRRC10BA6NIK2 292 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 CCT6AP40227 531 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 FNTAP49354 379 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 RAB27AP51159 221 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 STX17P56962 302 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 PDE4DQ08499 809 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 NR1I3Q14994 352 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 PRR16Q569H4 304 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 CCDC174Q6PII3 467 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 FOXR2Q6PJQ5 311 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 APTXQ7Z2E3 356 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 SCYL3Q8IZE3 742 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 LENG9Q96B70 501 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 THAP9Q9H5L6 903 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 BMP2KQ9NSY1 1161 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 MAP3K20Q9NYL2 800 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 PITPNM2Q9BZ72 1349 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 EME2A4GXA9 379 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 CFBP00751 764 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 EEF1GP26641 437 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 TBX2Q13207 712 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 LDHDQ86WU2 507 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 NCAPG2Q86XI2 1143 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 GOLGA1Q92805 767 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 SAAL1Q96ER3 474 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 ATP6V0A4Q9HBG4 840 aa10.61□□□□□ -0.71
LINC01539-201ENST00000587904 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
LINC01539-201ENST00000587904 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 MYMKA6NI61 221 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 FAM86B1E9PN63 330 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 FAM86B2P0C5J1 330 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 CCNE1P24864 410 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
LINC01539-201ENST00000587904 ZNF76P36508 570 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 HSD17B4P51659 736 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 SPIRE1Q08AE8 756 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 MCM6Q14566 821 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 ZRSR2Q15696 482 aaKnown RBP10.6□□□□□ -0.71
LINC01539-201ENST00000587904 TLDC1Q6P9B6 456 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 DNAJC14Q6Y2X3 702 aaPredicted RBP10.6□□□□□ -0.71
LINC01539-201ENST00000587904 ARMCX6Q7L4S7 300 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 CCDC97Q96F63 343 aaPredicted RBP10.6□□□□□ -0.71
LINC01539-201ENST00000587904 PICK1Q9NRD5 415 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
LINC01539-201ENST00000587904 IGLV3-22A0A075B6J6 115 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 KCNJ18B7U540 433 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 TUBBP07437 444 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 KCNJ12Q14500 433 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 TCP11X2Q5H9J9 407 aa10.59□□□□□ -0.71
LINC01539-201ENST00000587904 BEND6Q5SZJ8 279 aaPredicted RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 NBPF12Q5TAG4 269 aaPredicted RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 ANGEL2Q5VTE6 544 aaKnown RBP10.59□□□□□ -0.71
LINC01539-201ENST00000587904 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms