RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 STAT5BP51692 787 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 ACTR2P61160 394 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-209ENST00000586538 MBTPS1Q14703 1052 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-209ENST00000586538 ODR4Q5SWX8 454 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 MIS18BP1Q6P0N0 1132 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 WNT8BQ93098 351 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 YME1L1Q96TA2 773 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 BCAS3Q9H6U6 928 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 RWDD3Q9Y3V2 267 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 A0A0C4DFX4 3053 aa12.8□□□□□ -0.36
ACTN4-209ENST00000586538 BACH1O14867 736 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 IFNAR1P17181 557 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
ACTN4-209ENST00000586538 ERVK-21P61565 698 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 HIC1Q14526 733 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 PTPROQ16827 1216 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-209ENST00000586538 NME8Q8N427 588 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 CERS4Q9HA82 394 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 AGO4Q9HCK5 861 aaKnown RBP12.79□□□□□ -0.36
ACTN4-209ENST00000586538 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-209ENST00000586538 MTCH2Q9Y6C9 303 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 COL1A2P08123 1366 aa12.79□□□□□ -0.36
ACTN4-209ENST00000586538 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
ACTN4-209ENST00000586538 HBP1O60381 514 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 ATG7O95352 703 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 EVCP57679 992 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 IGBP1P78318 339 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 HTRA4P83105 476 aaPredicted RBP12.78□□□□□ -0.36
ACTN4-209ENST00000586538 KRT76Q01546 638 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 JAKMIP3Q5VZ66 844 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 TSHZ1Q6ZSZ6 1077 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 TOP1MTQ969P6 601 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 CEP131Q9UPN4 1083 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 SIP14410 1827 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 PTPRSQ13332 1948 aa12.78□□□□□ -0.36
ACTN4-209ENST00000586538 SMIM35A0A1B0GVV1 85 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 CDKL5O76039 1030 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 DEXIO95424 95 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 INSRRP14616 1297 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 XBP1P17861 261 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 SSRP1Q08945 709 aaKnown RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 GRB10Q13322 594 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 ZNF746Q6NUN9 644 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 FAM117BQ6P1L5 589 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-209ENST00000586538 FAM167AQ96KS9 214 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 ZNF302Q9NR11 478 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 PCDHA2Q9Y5H9 948 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
ACTN4-209ENST00000586538 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 TNFRSF10AO00220 468 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 PSAPP07602 524 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 ARP10275 920 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 GHRP10912 638 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 CPA1P15085 419 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 PDIA3P30101 505 aaKnown RBP12.76□□□□□ -0.37
ACTN4-209ENST00000586538 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-209ENST00000586538 PLCB4Q15147 1175 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 TIGD5Q53EQ6 642 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 ZNF484Q5JVG2 852 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
ACTN4-209ENST00000586538 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 DNAJB3Q8WWF6 145 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-209ENST00000586538 HLA-CQ95604 372 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 TMEM260Q9NX78 707 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
ACTN4-209ENST00000586538 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-209ENST00000586538 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms