RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
COPS3-217ENST00000583160 SLC52A2Q9HAB3 445 aa6.23□□□□□ -1.41
COPS3-217ENST00000583160 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
COPS3-217ENST00000583160 KCND1Q9NSA2 647 aa6.23□□□□□ -1.41
COPS3-217ENST00000583160 ATP23Q9Y6H3 246 aa6.23□□□□□ -1.41
COPS3-217ENST00000583160 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 CCDC66A2RUB6 948 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 EFCAB14O75071 495 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 KNG1P01042 644 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 MAGEA10P43363 369 aaPredicted RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 PPP2CBP62714 309 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 PPP2CAP67775 309 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 DBPQ10586 325 aaPredicted RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 FAM47CQ5HY64 1035 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 SLC7A14Q8TBB6 771 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 LOXL4Q96JB6 756 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 TACO1Q9BSH4 297 aaKnown RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 SSBP3Q9BWW4 388 aaPredicted RBP6.22□□□□□ -1.41
COPS3-217ENST00000583160 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 SMPD4Q9NXE4 827 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 PPP4R1LQ9P1A2 415 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 ADAM29Q9UKF5 820 aa6.22□□□□□ -1.41
COPS3-217ENST00000583160 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 FIGNQ5HY92 759 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 ARHGEF18Q6ZSZ5 1173 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 Q6ZUG5 572 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 JMYQ8N9B5 988 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 GSTCDQ8NEC7 633 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 ZSWIM2Q8NEG5 633 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 THAP3Q8WTV1 239 aaPredicted RBP6.21□□□□□ -1.42
COPS3-217ENST00000583160 MAGEB10Q96LZ2 347 aaPredicted RBP6.21□□□□□ -1.42
COPS3-217ENST00000583160 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
COPS3-217ENST00000583160 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
COPS3-217ENST00000583160 CCDC163A0A0D9SF12 145 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 KCNK3O14649 394 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 APPP05067 770 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 GJA4P35212 333 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 ADAM17P78536 824 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 LACTBP83111 547 aaPredicted RBP6.2□□□□□ -1.42
COPS3-217ENST00000583160 GGNQ86UU5 652 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 AJUBAQ96IF1 538 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 GPR20Q99678 358 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 SMURF1Q9HCE7 757 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 JADE2Q9NQC1 790 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 ARHGAP28Q9P2N2 729 aa6.2□□□□□ -1.42
COPS3-217ENST00000583160 NPEPPSL1A6NEC2 478 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 H0Y858 1186 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 CLASP2O75122 1294 aaKnown RBP6.19□□□□□ -1.42
COPS3-217ENST00000583160 RASGRP1O95267 797 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 TRIM61Q5EBN2 209 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 CISD2Q8N5K1 135 aaKnown RBP6.19□□□□□ -1.42
COPS3-217ENST00000583160 TTC9BQ8N6N2 239 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 CHST13Q8NET6 341 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 OSBPL2Q9H1P3 480 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 COQ6Q9Y2Z9 468 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 PTCH2Q9Y6C5 1203 aa6.19□□□□□ -1.42
COPS3-217ENST00000583160 PRAMEF25A6NGN4 478 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 C4BPAP04003 597 aaKnown RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 INSRRP14616 1297 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 EPHB4P54760 987 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 ZXDCQ2QGD7 858 aaPredicted RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 C2orf27AQ580R0 203 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 DPP8Q6V1X1 898 aaPredicted RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 GPR155Q7Z3F1 870 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 RALYLQ86SE5 291 aaKnown RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 SCLYQ96I15 445 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 PTPN18Q99952 460 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 MRPL4Q9BYD3 311 aaKnown RBP6.18□□□□□ -1.42
COPS3-217ENST00000583160 KATNBL1Q9H079 304 aa6.18□□□□□ -1.42
COPS3-217ENST00000583160 GPR42O15529 346 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 PTGS1P23219 599 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 CSF2RBP32927 897 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 HERVK_113P62684 666 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 CPZQ66K79 652 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 BRAPQ7Z569 592 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 CIR1Q86X95 450 aaPredicted RBP6.17□□□□□ -1.42
COPS3-217ENST00000583160 ST6GALNAC2Q9UJ37 374 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 CDK11AQ9UQ88 783 aaPredicted RBP6.17□□□□□ -1.42
COPS3-217ENST00000583160 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
COPS3-217ENST00000583160 ESYT3A0FGR9 886 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 SCDO00767 359 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 KCNA6P17658 529 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 AOAHP28039 575 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 POLD1P28340 1107 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 ICAM4Q14773 271 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 SEC23AQ15436 765 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 SLFN13Q68D06 897 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 FGD2Q7Z6J4 655 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 REXO1L1PQ8IX06 675 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
COPS3-217ENST00000583160 INCENPQ9NQS7 918 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 GALNT8Q9NY28 637 aa6.16□□□□□ -1.42
COPS3-217ENST00000583160 BTBD7Q9P203 1132 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms