RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 MARK3P27448 753 aa25.46■■□□□ 1.67
CASC3-207ENST00000581849 ZNF76P36508 570 aa25.46■■□□□ 1.67
CASC3-207ENST00000581849 SLC26A2P50443 739 aa25.46■■□□□ 1.67
CASC3-207ENST00000581849 ITGB3BPQ13352 177 aaPredicted RBP25.46■■□□□ 1.67
CASC3-207ENST00000581849 TJAP1Q5JTD0 557 aa25.46■■□□□ 1.67
CASC3-207ENST00000581849 REXO1Q8N1G1 1221 aaKnown RBP25.46■■□□□ 1.67
CASC3-207ENST00000581849 CCDC148Q8NFR7 591 aa25.46■■□□□ 1.67
CASC3-207ENST00000581849 PDIA3P30101 505 aaKnown RBP25.45■■□□□ 1.66
CASC3-207ENST00000581849 JAKMIP3Q5VZ66 844 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 ERICH6BQ5W0A0 696 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.45■■□□□ 1.66
CASC3-207ENST00000581849 BICD2Q8TD16 824 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 PPM1EQ8WY54 764 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 ARNTL2Q8WYA1 636 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 TSPYL2Q9H2G4 693 aaPredicted RBP25.45■■□□□ 1.66
CASC3-207ENST00000581849 INSL6Q9Y581 213 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 MTCH2Q9Y6C9 303 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 COL4A6Q14031 1691 aa25.45■■□□□ 1.66
CASC3-207ENST00000581849 LCHNA4D1U4 455 aa25.44■■□□□ 1.66
CASC3-207ENST00000581849 STAT5BP51692 787 aa25.44■■□□□ 1.66
CASC3-207ENST00000581849 HTRA4P83105 476 aaPredicted RBP25.44■■□□□ 1.66
CASC3-207ENST00000581849 SETQ01105 290 aaPredicted RBP25.44■■□□□ 1.66
CASC3-207ENST00000581849 MARCH8Q5T0T0 291 aa25.44■■□□□ 1.66
CASC3-207ENST00000581849 TMCO2Q7Z6W1 182 aaPredicted RBP25.44■■□□□ 1.66
CASC3-207ENST00000581849 CERS4Q9HA82 394 aa25.44■■□□□ 1.66
CASC3-207ENST00000581849 CYP46A1Q9Y6A2 500 aa25.44■■□□□ 1.66
CASC3-207ENST00000581849 PRRC2BQ5JSZ5 2229 aaKnown RBP25.43■■□□□ 1.66
CASC3-207ENST00000581849 IGLV3-22A0A075B6J6 115 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 IGKV6D-21A0A0A0MT36 114 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 EPOPA6NHQ4 379 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 FAM86B1E9PN63 330 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 CHRNA1P02708 482 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 FAM86B2P0C5J1 330 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 INSRRP14616 1297 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 ERVK-21P61565 698 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 MGAT3Q09327 533 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 RUFY4Q6ZNE9 571 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 PLA2G4DQ86XP0 818 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 MYOCDQ8IZQ8 938 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 PHKBQ93100 1093 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 TGS1Q96RS0 853 aaKnown RBP25.43■■□□□ 1.66
CASC3-207ENST00000581849 IFIH1Q9BYX4 1025 aaKnown RBP25.43■■□□□ 1.66
CASC3-207ENST00000581849 SH3GLB2Q9NR46 395 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 LMCD1Q9NZU5 365 aa25.43■■□□□ 1.66
CASC3-207ENST00000581849 TOB2Q14106 344 aaPredicted RBP25.42■■□□□ 1.66
CASC3-207ENST00000581849 CCDC85BQ15834 202 aaPredicted RBP25.42■■□□□ 1.66
CASC3-207ENST00000581849 SP7Q8TDD2 431 aaPredicted RBP25.42■■□□□ 1.66
CASC3-207ENST00000581849 TOP1MTQ969P6 601 aa25.42■■□□□ 1.66
CASC3-207ENST00000581849 ZNF274Q96GC6 653 aaPredicted RBP25.42■■□□□ 1.66
CASC3-207ENST00000581849 SQORQ9Y6N5 450 aa25.42■■□□□ 1.66
CASC3-207ENST00000581849 SIP14410 1827 aa25.42■■□□□ 1.66
CASC3-207ENST00000581849 LINC01553A4QN01 128 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 RFXAPO00287 272 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 CIITAP33076 1130 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 PLCB4Q15147 1175 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 FAM177A1Q8N128 213 aaPredicted RBP25.41■■□□□ 1.66
CASC3-207ENST00000581849 SLC26A6Q9BXS9 759 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 OSBPL7Q9BZF2 842 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 PRDM6Q9NQX0 595 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 TBC1D22BQ9NU19 505 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 TRPC6Q9Y210 931 aa25.41■■□□□ 1.66
CASC3-207ENST00000581849 COL4A4P53420 1690 aaPredicted RBP25.41■■□□□ 1.66
CASC3-207ENST00000581849 IPO5O00410 1097 aaKnown RBP25.4■■□□□ 1.66
CASC3-207ENST00000581849 DHX15O43143 795 aaKnown RBP25.4■■□□□ 1.66
CASC3-207ENST00000581849 CCNE2O96020 404 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 GRB10Q13322 594 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 FAM160B1Q5W0V3 765 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 ABHD15Q6UXT9 468 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 FAM43BQ6ZT52 329 aaPredicted RBP25.4■■□□□ 1.66
CASC3-207ENST00000581849 TRIM22Q8IYM9 498 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 DNAJB3Q8WWF6 145 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 PPP4R2Q9NY27 417 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 PCDHA2Q9Y5H9 948 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 TTC28Q96AY4 2481 aa25.4■■□□□ 1.66
CASC3-207ENST00000581849 VCANP13611 3396 aa25.39■■□□□ 1.66
CASC3-207ENST00000581849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.39■■□□□ 1.66
CASC3-207ENST00000581849 LPXNO60711 386 aa25.39■■□□□ 1.66
CASC3-207ENST00000581849 CCT2P78371 535 aaKnown RBP25.39■■□□□ 1.66
CASC3-207ENST00000581849 MRPS5P82675 430 aaKnown RBP25.39■■□□□ 1.66
CASC3-207ENST00000581849 MRPS6P82932 125 aaKnown RBP25.39■■□□□ 1.66
CASC3-207ENST00000581849 IER5Q5VY09 327 aa25.39■■□□□ 1.66
CASC3-207ENST00000581849 SAMD11Q96NU1 681 aa25.39■■□□□ 1.66
CASC3-207ENST00000581849 ASB2Q96Q27 587 aa25.39■■□□□ 1.66
CASC3-207ENST00000581849 POTEB3A0JP26 581 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 HBP1O60381 514 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 GHRP10912 638 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 IGBP1P78318 339 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 LPIN1Q14693 890 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 FBXO47Q5MNV8 452 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 ZNF746Q6NUN9 644 aaPredicted RBP25.38■■□□□ 1.65
CASC3-207ENST00000581849 MIS18BP1Q6P0N0 1132 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 FAM117BQ6P1L5 589 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 POTEBQ6S5H4 581 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 TSHZ1Q6ZSZ6 1077 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 SMAP1Q8IYB5 467 aaPredicted RBP25.38■■□□□ 1.65
CASC3-207ENST00000581849 MICALL1Q8N3F8 863 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 ZNF577Q9BSK1 485 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 C22orf23Q9BZE7 217 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 NCOA5Q9HCD5 579 aaKnown RBP25.38■■□□□ 1.65
CASC3-207ENST00000581849 CDY2AQ9Y6F7 541 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms