RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 NCOA5Q9HCD5 579 aaKnown RBP24.27■■□□□ 1.48
CSNK1D-215ENST00000580784 C6orf50Q9HD87 102 aa24.27■■□□□ 1.48
CSNK1D-215ENST00000580784 FAM86B1E9PN63 330 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 CHRNA1P02708 482 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 FAM86B2P0C5J1 330 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 IGBP1P78318 339 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 AKAP17AQ02040 695 aaKnown RBP24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 TOB2Q14106 344 aaPredicted RBP24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 MICALL1Q8N3F8 863 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 CCDC12Q8WUD4 166 aaPredicted RBP24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 CRYGNQ8WXF5 182 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 ZBTB10Q96DT7 871 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 SLC26A6Q9BXS9 759 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 TUBE1Q9UJT0 475 aa24.26■■□□□ 1.47
CSNK1D-215ENST00000580784 MBLAC1A4D2B0 266 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 AMHP03971 560 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 INSRRP14616 1297 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 IFNAR1P17181 557 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 POU3F3P20264 500 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 TAF2Q6P1X5 1199 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 NIPA1Q7RTP0 329 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 RPAINQ86UA6 219 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 PLA2G4DQ86XP0 818 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 MYOCDQ8IZQ8 938 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 REXO1Q8N1G1 1221 aaKnown RBP24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 UIMC1Q96RL1 719 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 RNF26Q9BY78 433 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 MTCH2Q9Y6C9 303 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 SIP14410 1827 aa24.25■■□□□ 1.47
CSNK1D-215ENST00000580784 IGLV3-22A0A075B6J6 115 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 DDX39AO00148 427 aaKnown RBP24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 ATG7O95352 703 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 CYP3A4P08684 503 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 STAT5BP51692 787 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 KRT40Q6A162 431 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 PLPPR4Q7Z2D5 763 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 DNAJB3Q8WWF6 145 aa24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 LARP6Q9BRS8 491 aaKnown RBP24.24■■□□□ 1.47
CSNK1D-215ENST00000580784 LINC01553A4QN01 128 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 RRN3P2A6NIE6 340 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 CCNE2O96020 404 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 GNA11P29992 359 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 GRB10Q13322 594 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 PLCB4Q15147 1175 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 MCTP2Q6DN12 878 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 RASGRP4Q8TDF6 673 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 IFIH1Q9BYX4 1025 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 UPF3BQ9BZI7 483 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 PPP4R2Q9NY27 417 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 TRPC6Q9Y210 931 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 INSL6Q9Y581 213 aa24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 SPTBN5Q9NRC6 3674 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-215ENST00000580784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 DHX15O43143 795 aaKnown RBP24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 GTPBP6O43824 516 aaPredicted RBP24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 MGAT3Q09327 533 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 RSPH3Q86UC2 560 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 TM6SF1Q9BZW5 370 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 VPS54Q9P1Q0 977 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 THEGQ9P2T0 379 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 MTUS1Q9ULD2 1270 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 LOXHD1Q8IVV2 1947 aa24.22■■□□□ 1.47
CSNK1D-215ENST00000580784 TTC28Q96AY4 2481 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 LPXNO60711 386 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 GHRP10912 638 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 HTRA4P83105 476 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 TJAP1Q5JTD0 557 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 ABHD15Q6UXT9 468 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 ATXN2LQ8WWM7 1075 aaKnown RBP24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 TOP1MTQ969P6 601 aa24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 FAM49AQ9H0Q0 323 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 COL4A4P53420 1690 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-215ENST00000580784 IGKV6D-21A0A0A0MT36 114 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 IPO5O00410 1097 aaKnown RBP24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 UPP2O95045 317 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 ERVK-21P61565 698 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 LPIN1Q14693 890 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 CCDC148Q8NFR7 591 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 BICD2Q8TD16 824 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 APBB2Q92870 758 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 TNPO1Q92973 898 aaKnown RBP24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 ZNF274Q96GC6 653 aaPredicted RBP24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 TGS1Q96RS0 853 aaKnown RBP24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 ZNF577Q9BSK1 485 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 CDY2AQ9Y6F7 541 aa24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 MYH9P35579 1960 aaKnown RBP24.2■■□□□ 1.46
CSNK1D-215ENST00000580784 POTEB3A0JP26 581 aa24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 BACH1O14867 736 aa24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 POTEBQ6S5H4 581 aa24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 GDPD5Q8WTR4 605 aa24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 SYMPKQ92797 1274 aaKnown RBP24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 SUGCTQ9HAC7 445 aa24.19■■□□□ 1.46
CSNK1D-215ENST00000580784 MRPS6P82932 125 aaKnown RBP24.18■■□□□ 1.46
CSNK1D-215ENST00000580784 SSRP1Q08945 709 aaKnown RBP24.18■■□□□ 1.46
CSNK1D-215ENST00000580784 STK3Q13188 491 aa24.18■■□□□ 1.46
CSNK1D-215ENST00000580784 SKIV2LQ15477 1246 aaKnown RBP24.18■■□□□ 1.46
CSNK1D-215ENST00000580784 PRR16Q569H4 304 aa24.18■■□□□ 1.46
CSNK1D-215ENST00000580784 FBXO47Q5MNV8 452 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms