RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 PRR16Q569H4 304 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 TRAF7Q6Q0C0 670 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF3B3-215ENST00000577085 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
SF3B3-215ENST00000577085 CDH23Q9H251 3354 aa17.62■□□□□ 0.41
SF3B3-215ENST00000577085 RPLP2P05387 115 aaKnown RBP17.61■□□□□ 0.41
SF3B3-215ENST00000577085 SLC26A2P50443 739 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 MBTPS1Q14703 1052 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 MIS18BP1Q6P0N0 1132 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 PLPPR4Q7Z2D5 763 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 DBF4BQ8NFT6 615 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 PPM1EQ8WY54 764 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 UIMC1Q96RL1 719 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 C22orf23Q9BZE7 217 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 TBC1D22BQ9NU19 505 aa17.61■□□□□ 0.41
SF3B3-215ENST00000577085 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 M0QZ92 97 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 INSRRP14616 1297 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 XBP1P17861 261 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 ADAM17P78536 824 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 DEFB103AP81534 67 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 PLEKHG4Q58EX7 1191 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 FAM117BQ6P1L5 589 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 RUFY4Q6ZNE9 571 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 APBB2Q92870 758 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 GBF1Q92538 1859 aa17.6■□□□□ 0.41
SF3B3-215ENST00000577085 IGLV3-22A0A075B6J6 115 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 TMCO2Q7Z6W1 182 aaPredicted RBP17.59■□□□□ 0.41
SF3B3-215ENST00000577085 MYOCDQ8IZQ8 938 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 DNAJB3Q8WWF6 145 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 PCYT2Q99447 389 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 RAD9AQ99638 391 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
SF3B3-215ENST00000577085 FAM49AQ9H0Q0 323 aaPredicted RBP17.59■□□□□ 0.41
SF3B3-215ENST00000577085 CERS4Q9HA82 394 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 ZNF302Q9NR11 478 aa17.59■□□□□ 0.41
SF3B3-215ENST00000577085 MBLAC1A4D2B0 266 aaPredicted RBP17.58■□□□□ 0.4
SF3B3-215ENST00000577085 ADAMTS3O15072 1205 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 GTPBP6O43824 516 aaPredicted RBP17.58■□□□□ 0.4
SF3B3-215ENST00000577085 GJB5O95377 273 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 CCNE2O96020 404 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 USP11P51784 963 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 KRT76Q01546 638 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 IER5Q5VY09 327 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 GALNT17Q6IS24 598 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 ZNF746Q6NUN9 644 aaPredicted RBP17.58■□□□□ 0.4
SF3B3-215ENST00000577085 SWSAP1Q6NVH7 229 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 PDXDC2PQ6P474 469 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
SF3B3-215ENST00000577085 BLIDQ8IZY5 108 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.4
SF3B3-215ENST00000577085 CRYGNQ8WXF5 182 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
SF3B3-215ENST00000577085 DLL1O00548 723 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 ATG7O95352 703 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 PSAPP07602 524 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 GHRP10912 638 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 CIITAP33076 1130 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 TAP1Q03518 808 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 SCRN1Q12765 414 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 CCDC85BQ15834 202 aaPredicted RBP17.57■□□□□ 0.4
SF3B3-215ENST00000577085 TCTN1Q2MV58 587 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 FAM26DQ5JW98 314 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 MARCH8Q5T0T0 291 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 ABHD15Q6UXT9 468 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.57■□□□□ 0.4
SF3B3-215ENST00000577085 RPAINQ86UA6 219 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 MICALL1Q8N3F8 863 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 TBCKQ8TEA7 893 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 TPCN1Q9ULQ1 816 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 EYSQ5T1H1 3165 aa17.57■□□□□ 0.4
SF3B3-215ENST00000577085 DHX15O43143 795 aaKnown RBP17.56■□□□□ 0.4
SF3B3-215ENST00000577085 HBP1O60381 514 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 PFKFB2O60825 505 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 CHRNA1P02708 482 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 AK2P54819 239 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 MRPS6P82932 125 aaKnown RBP17.56■□□□□ 0.4
SF3B3-215ENST00000577085 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 TRAPPC12Q8WVT3 735 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 WASF1Q92558 559 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
SF3B3-215ENST00000577085 INSL6Q9Y581 213 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 PCDHA2Q9Y5H9 948 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 PCDHA10Q9Y5I2 948 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 CDY2AQ9Y6F7 541 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 TET1Q8NFU7 2136 aa17.56■□□□□ 0.4
SF3B3-215ENST00000577085 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 IGKV6D-21A0A0A0MT36 114 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 GAS7O60861 476 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 UPP2O95045 317 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 TMEM62Q0P6H9 643 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 ADGRE1Q14246 886 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms