RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 FNIP2Q9P278 1114 aa2.57□□□□□ -2
CHD3-217ENST00000574022 NXF1Q9UBU9 619 aaKnown RBP2.57□□□□□ -2
CHD3-217ENST00000574022 LRCH1Q9Y2L9 728 aa2.57□□□□□ -2
CHD3-217ENST00000574022 SCINQ9Y6U3 715 aa2.57□□□□□ -2
CHD3-217ENST00000574022 hCG_1642624A0A1W2PR95 340 aa2.56□□□□□ -2
CHD3-217ENST00000574022 C7orf72A4D263 438 aa2.56□□□□□ -2
CHD3-217ENST00000574022 FAM227AF5H4B4 570 aa2.56□□□□□ -2
CHD3-217ENST00000574022 F8W735 103 aaPredicted RBP2.56□□□□□ -2
CHD3-217ENST00000574022 H3BML4 177 aa2.56□□□□□ -2
CHD3-217ENST00000574022 H7BY64 318 aa2.56□□□□□ -2
CHD3-217ENST00000574022 GOLIM4O00461 696 aa2.56□□□□□ -2
CHD3-217ENST00000574022 SCDO00767 359 aa2.56□□□□□ -2
CHD3-217ENST00000574022 NPHS1O60500 1241 aa2.56□□□□□ -2
CHD3-217ENST00000574022 LEFTY1O75610 366 aa2.56□□□□□ -2
CHD3-217ENST00000574022 UBXN7O94888 489 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ALX3O95076 343 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ZNF205O95201 554 aa2.56□□□□□ -2
CHD3-217ENST00000574022 OSMP13725 252 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ENPP1P22413 925 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RXRBP28702 533 aa2.56□□□□□ -2
CHD3-217ENST00000574022 TM4SF4P48230 202 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CCT5P48643 541 aa2.56□□□□□ -2
CHD3-217ENST00000574022 MTNR1BP49286 362 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CACNB3P54284 484 aa2.56□□□□□ -2
CHD3-217ENST00000574022 PCBP3P57721 371 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 ALDH6A1Q02252 535 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 TNK2Q07912 1038 aa2.56□□□□□ -2
CHD3-217ENST00000574022 LAPTM5Q13571 262 aa2.56□□□□□ -2
CHD3-217ENST00000574022 TMEM132BQ14DG7 1078 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ELF2Q15723 593 aa2.56□□□□□ -2
CHD3-217ENST00000574022 FSCN1Q16658 493 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 IFI16Q16666 785 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 SGO2Q562F6 1265 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CT83Q5H943 113 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RTP2Q5QGT7 225 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RNF220Q5VTB9 566 aa2.56□□□□□ -2
CHD3-217ENST00000574022 DUSP27Q5VZP5 1158 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CCDC174Q6PII3 467 aa2.56□□□□□ -2
CHD3-217ENST00000574022 SEZ6L2Q6UXD5 910 aa2.56□□□□□ -2
CHD3-217ENST00000574022 KRBA2Q6ZNG9 492 aa2.56□□□□□ -2
CHD3-217ENST00000574022 USP45Q70EL2 814 aa2.56□□□□□ -2
CHD3-217ENST00000574022 DPP9Q86TI2 863 aa2.56□□□□□ -2
CHD3-217ENST00000574022 DENND1CQ8IV53 801 aa2.56□□□□□ -2
CHD3-217ENST00000574022 SIRT2Q8IXJ6 389 aa2.56□□□□□ -2
CHD3-217ENST00000574022 THEMISQ8N1K5 641 aaPredicted RBP2.56□□□□□ -2
CHD3-217ENST00000574022 CLASRPQ8N2M8 674 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 TMTC2Q8N394 836 aa2.56□□□□□ -2
CHD3-217ENST00000574022 NKAPQ8N5F7 415 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 NAT16Q8N8M0 369 aa2.56□□□□□ -2
CHD3-217ENST00000574022 SPATA5Q8NB90 893 aa2.56□□□□□ -2
CHD3-217ENST00000574022 LINC00116Q8NCU8 138 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.56□□□□□ -2
CHD3-217ENST00000574022 DEPTORQ8TB45 409 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CCT6BQ92526 530 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RTF1Q92541 710 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 EZH1Q92800 747 aaPredicted RBP2.56□□□□□ -2
CHD3-217ENST00000574022 COA7Q96BR5 231 aa2.56□□□□□ -2
CHD3-217ENST00000574022 EAF2Q96CJ1 260 aaPredicted RBP2.56□□□□□ -2
CHD3-217ENST00000574022 ZNF496Q96IT1 587 aaPredicted RBP2.56□□□□□ -2
CHD3-217ENST00000574022 CRB3Q9BUF7 120 aa2.56□□□□□ -2
CHD3-217ENST00000574022 CDADC1Q9BWV3 514 aa2.56□□□□□ -2
CHD3-217ENST00000574022 APOL5Q9BWW9 433 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ANO3Q9BYT9 981 aa2.56□□□□□ -2
CHD3-217ENST00000574022 GPR62Q9BZJ7 368 aa2.56□□□□□ -2
CHD3-217ENST00000574022 NUP62CLQ9H1M0 184 aa2.56□□□□□ -2
CHD3-217ENST00000574022 BHMT2Q9H2M3 363 aa2.56□□□□□ -2
CHD3-217ENST00000574022 TRIT1Q9H3H1 467 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 SMOC1Q9H4F8 434 aa2.56□□□□□ -2
CHD3-217ENST00000574022 AKTIPQ9H8T0 292 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RRAGCQ9HB90 399 aa2.56□□□□□ -2
CHD3-217ENST00000574022 ARFGAP3Q9NP61 516 aa2.56□□□□□ -2
CHD3-217ENST00000574022 C1GALT1Q9NS00 363 aa2.56□□□□□ -2
CHD3-217ENST00000574022 AP5S1Q9NUS5 200 aa2.56□□□□□ -2
CHD3-217ENST00000574022 BTG4Q9NY30 223 aa2.56□□□□□ -2
CHD3-217ENST00000574022 RTEL1Q9NZ71 1219 aa2.56□□□□□ -2
CHD3-217ENST00000574022 USP36Q9P275 1121 aaKnown RBP2.56□□□□□ -2
CHD3-217ENST00000574022 ADGRE2Q9UHX3 823 aa2.56□□□□□ -2
CHD3-217ENST00000574022 MSRAQ9UJ68 235 aa2.56□□□□□ -2
CHD3-217ENST00000574022 FBXL7Q9UJT9 491 aa2.56□□□□□ -2
CHD3-217ENST00000574022 L1RE1Q9UN81 338 aa2.56□□□□□ -2
CHD3-217ENST00000574022 EDARQ9UNE0 448 aa2.56□□□□□ -2
CHD3-217ENST00000574022 POLHQ9Y253 713 aa2.56□□□□□ -2
CHD3-217ENST00000574022 B3GALT1Q9Y5Z6 326 aa2.56□□□□□ -2
CHD3-217ENST00000574022 DGKBQ9Y6T7 804 aa2.56□□□□□ -2
CHD3-217ENST00000574022 FAM95CA0A1B0GW59 222 aa2.55□□□□□ -2
CHD3-217ENST00000574022 TCRBV5S4A2TA0A5A2 114 aa2.55□□□□□ -2
CHD3-217ENST00000574022 CAPN8A6NHC0 703 aa2.55□□□□□ -2
CHD3-217ENST00000574022 PRR33A8MZF0 331 aa2.55□□□□□ -2
CHD3-217ENST00000574022 FAM155AB1AL88 458 aaPredicted RBP2.55□□□□□ -2
CHD3-217ENST00000574022 RASA4BC9J798 803 aa2.55□□□□□ -2
CHD3-217ENST00000574022 PRRT4C9JH25 899 aa2.55□□□□□ -2
CHD3-217ENST00000574022 H3BM21 787 aa2.55□□□□□ -2
CHD3-217ENST00000574022 MAN2B1O00754 1011 aa2.55□□□□□ -2
CHD3-217ENST00000574022 NKRFO15226 690 aaKnown RBP eCLIP2.55□□□□□ -2
CHD3-217ENST00000574022 FGF10O15520 208 aaPredicted RBP2.55□□□□□ -2
CHD3-217ENST00000574022 RASA4O43374 803 aa2.55□□□□□ -2
CHD3-217ENST00000574022 B3GALT2O43825 422 aa2.55□□□□□ -2
CHD3-217ENST00000574022 MGEA5O60502 916 aa2.55□□□□□ -2
CHD3-217ENST00000574022 DTNBO60941 627 aa2.55□□□□□ -2
CHD3-217ENST00000574022 FKTNO75072 461 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms