RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 UPP2O95045 317 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 GNA11P29992 359 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 ACTR2P61160 394 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.655e-8■□□□□ 10.5
NPLOC4-212ENST00000573328 RUFY4Q6ZNE9 571 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 PLA2G4DQ86XP0 818 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 APBB2Q92870 758 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 TNPO1Q92973 898 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 RAD9AQ99638 391 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 IFIH1Q9BYX4 1025 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM49AQ9H0Q0 323 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 KIAA1671Q9BY89 1806 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 NFASCO94856 1347 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 VCANP13611 3396 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 EPOPA6NHQ4 379 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 M0QZ92 97 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 CPLX1O14810 134 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 GHRP10912 638 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 ADAM17P78536 824 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 SETQ01105 290 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 ITGB3BPQ13352 177 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 DNAJB3Q8WWF6 145 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 UIMC1Q96RL1 719 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 UPF3BQ9BZI7 483 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
NPLOC4-212ENST00000573328 LINC01553A4QN01 128 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 MEIS1O00470 390 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 INSRRP14616 1297 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 IFNAR1P17181 557 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 STAT5BP51692 787 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 SSRP1Q08945 709 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 STK3Q13188 491 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 GRB10Q13322 594 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 PKN1Q16512 942 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 KRT40Q6A162 431 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 NIPA1Q7RTP0 329 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 RASGRP4Q8TDF6 673 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 TRAPPC12Q8WVT3 735 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 TGS1Q96RS0 853 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 PCYT2Q99447 389 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 ZNF577Q9BSK1 485 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 MTCH2Q9Y6C9 303 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
NPLOC4-212ENST00000573328 TTC3P53804 2025 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 MBLAC1A4D2B0 266 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM86B1E9PN63 330 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 CHRNA1P02708 482 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 CYP3A4P08684 503 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM86B2P0C5J1 330 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 NLRP5P59047 1200 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 MRPS6P82932 125 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 TOB2Q14106 344 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 PLCB4Q15147 1175 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 NTRK3Q16288 839 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 PRR16Q569H4 304 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM26DQ5JW98 314 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 MIS18BP1Q6P0N0 1132 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 PLPPR4Q7Z2D5 763 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 ATXN2LQ8WWM7 1075 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 OSBPL7Q9BZF2 842 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 ZSWIM6Q9HCJ5 1215 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
NPLOC4-212ENST00000573328 ADAMTS3O15072 1205 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms