RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 SEPT1Q8WYJ6 367 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 GLG1Q92896 1179 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 CLP1Q92989 425 aaKnown RBP16.44■□□□□ 0.22
CIITA-205ENST00000571186 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
CIITA-205ENST00000571186 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
CIITA-205ENST00000571186 TUBE1Q9UJT0 475 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 EVPLQ92817 2033 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 KIAA1671Q9BY89 1806 aa16.44■□□□□ 0.22
CIITA-205ENST00000571186 GSTTP1A0A1W2PQM5 241 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 PIK3CDO00329 1044 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 SLC27A2O14975 620 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 MBTPS2O43462 519 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 MRE11P49959 708 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 IGBP1P78318 339 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 SMAD2Q15796 467 aaKnown RBP16.43■□□□□ 0.22
CIITA-205ENST00000571186 FBXO47Q5MNV8 452 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
CIITA-205ENST00000571186 ZNF689Q96CS4 500 aaPredicted RBP16.43■□□□□ 0.22
CIITA-205ENST00000571186 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 FBXL18Q96ME1 805 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
CIITA-205ENST00000571186 MYL10Q9BUA6 226 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 PKD2L1Q9P0L9 805 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 CDY2AQ9Y6F7 541 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 TECTAO75443 2155 aa16.43■□□□□ 0.22
CIITA-205ENST00000571186 LINC01565O15544 149 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 DGKIO75912 1065 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 KCNA2P16389 499 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 KIF5BP33176 963 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 ANTXR2P58335 489 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 NECTIN1Q15223 517 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 TSHZ1Q6ZSZ6 1077 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 HFE2Q6ZVN8 426 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 PLVAPQ9BX97 442 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 SMARCAD1Q9H4L7 1026 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 RC3H2Q9HBD1 1191 aaKnown RBP16.42■□□□□ 0.22
CIITA-205ENST00000571186 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 CD207Q9UJ71 328 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
CIITA-205ENST00000571186 STXBP3O00186 592 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 CD52P31358 61 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
CIITA-205ENST00000571186 NHLH1Q02575 133 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 ADAM15Q13444 863 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
CIITA-205ENST00000571186 MARCH8Q5T0T0 291 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 RNF135Q8IUD6 432 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
CIITA-205ENST00000571186 ZBTB10Q96DT7 871 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
CIITA-205ENST00000571186 KCNH6Q9H252 994 aa16.41■□□□□ 0.22
CIITA-205ENST00000571186 AGO3Q9H9G7 860 aaKnown RBP16.41■□□□□ 0.22
CIITA-205ENST00000571186 MBLAC1A4D2B0 266 aaPredicted RBP16.4■□□□□ 0.22
CIITA-205ENST00000571186 RRN3P2A6NIE6 340 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 TBX10O75333 385 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 MMP1P03956 469 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 ITGB5P18084 799 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 NDUFV1P49821 464 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 GNAQP50148 359 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 MTMR1Q13613 665 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
CIITA-205ENST00000571186 IER5Q5VY09 327 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 RTN4RL1Q86UN2 441 aaPredicted RBP16.4■□□□□ 0.22
CIITA-205ENST00000571186 PPP2R3CQ969Q6 453 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
CIITA-205ENST00000571186 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
CIITA-205ENST00000571186 PLXNA4Q9HCM2 1894 aa16.39■□□□□ 0.22
CIITA-205ENST00000571186 M0QZ92 97 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 DDAH1O94760 285 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 INSRRP14616 1297 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 TMEM62Q0P6H9 643 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 CAMK1Q14012 370 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 UBE2SQ16763 222 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
CIITA-205ENST00000571186 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
CIITA-205ENST00000571186 SRBD1Q8N5C6 995 aaKnown RBP16.39■□□□□ 0.21
CIITA-205ENST00000571186 SPPL3Q8TCT6 385 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 LINC01599Q8WXQ3 324 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 P2RX5Q93086 422 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 FTHL17Q9BXU8 183 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 LY9Q9HBG7 655 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 UBIAD1Q9Y5Z9 338 aa16.39■□□□□ 0.21
CIITA-205ENST00000571186 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 RPLP2P05387 115 aaKnown RBP16.38■□□□□ 0.21
CIITA-205ENST00000571186 ITGB1P05556 798 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 STAG3L1P0CL83 205 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms