RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 GET4Q7L5D6 327 aaPredicted RBP9.65□□□□□ -0.86
LINC00558-201ENST00000569422 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
LINC00558-201ENST00000569422 EHBP1Q8NDI1 1231 aa9.65□□□□□ -0.86
LINC00558-201ENST00000569422 NYAP2Q9P242 653 aa9.65□□□□□ -0.86
LINC00558-201ENST00000569422 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
LINC00558-201ENST00000569422 PACSIN2Q9UNF0 486 aaPredicted RBP9.65□□□□□ -0.86
LINC00558-201ENST00000569422 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.86
LINC00558-201ENST00000569422 GCNT3O95395 438 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 PSMD2Q13200 908 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 CASP8Q14790 479 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 CCDC181Q5TID7 509 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 RNF217Q8TC41 542 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 DCAF4Q8WV16 495 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 REEP2Q9BRK0 252 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 IGSF5Q9NSI5 407 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.87
LINC00558-201ENST00000569422 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 LRRIQ3A6PVS8 624 aaPredicted RBP9.64□□□□□ -0.87
LINC00558-201ENST00000569422 POTEB2H3BUK9 544 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 KIF20AO95235 890 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 TUBB2AQ13885 445 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 SETDB1Q15047 1291 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 SFMBT2Q5VUG0 894 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 ZNF280DQ6N043 979 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 BAP1Q92560 729 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 MS4A14Q96JA4 679 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 TUBB2BQ9BVA1 445 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 EHD4Q9H223 541 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 KCNMB3Q9NPA1 279 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 EML1O00423 815 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 CETN3O15182 167 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 MSH4O15457 936 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 PEX14O75381 377 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 FTCDO95954 541 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 SLC9A1P19634 815 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 USP11P51784 963 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 KCNH2Q12809 1159 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 KIAA1755Q5JYT7 1200 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 SLFN12Q8IYM2 578 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 RIN2Q8WYP3 895 aaPredicted RBP9.64□□□□□ -0.87
LINC00558-201ENST00000569422 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 SH2D3AQ9BRG2 576 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 BCS1LQ9Y276 419 aa9.64□□□□□ -0.87
LINC00558-201ENST00000569422 A0A1W2PQJ5 194 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 EHHADHQ08426 723 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 GPS2Q13227 327 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 PAPD7Q5XG87 772 aaKnown RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ERMNQ8TAM6 284 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 HDAC7Q8WUI4 952 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 PACSIN1Q9BY11 444 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 GOLPH3Q9H4A6 298 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 SH2D4AQ9H788 454 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 FBXO28Q9NVF7 368 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 RAB21Q9UL25 225 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 FAN1Q9Y2M0 1017 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 NUB1Q9Y5A7 615 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 SPATA31C1P0DKV0 1188 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 MYBL2P10244 700 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 CASP4P49662 377 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 USP14P54578 494 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 SLC12A3P55017 1021 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 GIT2Q14161 759 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TRIM58Q8NG06 486 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ETNPPLQ8TBG4 499 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ALS2CR12Q96Q35 445 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 IDI2Q9BXS1 227 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 PDGFDQ9GZP0 370 aaPredicted RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ATP8B1O43520 1251 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TLR2O60603 784 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TBCAO75347 108 aaKnown RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 NOL4O94818 638 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 STAT2P52630 851 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 KLHL30Q0D2K2 578 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ZCWPW2Q504Y3 356 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ZC2HC1CQ53FD0 456 aaPredicted RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 FIGNQ5HY92 759 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TATDN1Q6P1N9 297 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 MYCT1Q8N699 235 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 ADAMTSL1Q8N6G6 1762 aa9.63□□□□□ -0.87
LINC00558-201ENST00000569422 EIF2AK1Q9BQI3 630 aaKnown RBP9.63□□□□□ -0.87
LINC00558-201ENST00000569422 TSGA10Q9BZW7 698 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms