RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PDIA5Q14554 519 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 LY6KQ17RY6 165 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 PRAMEF19Q5SWL8 479 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 CELF3Q5SZQ8 465 aaKnown RBP11.75□□□□□ -0.53
CDH3-210ENST00000569117 IQSEC1Q6DN90 963 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 ZNF746Q6NUN9 644 aaPredicted RBP11.75□□□□□ -0.53
CDH3-210ENST00000569117 TRPV1Q8NER1 839 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 CLIC6Q96NY7 704 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 CSRNP2Q9H175 543 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 UNC45AQ9H3U1 944 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
CDH3-210ENST00000569117 ARID2Q68CP9 1835 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 WDR64B1ANS9 1081 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 SEPT4O43236 478 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 CCNE2O96020 404 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 GH1P01241 217 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 SMPD1P17405 629 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 SFNP31947 248 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 JAK3P52333 1124 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 TNFAIP2Q03169 654 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 ADALQ6DHV7 355 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 FBXO46Q6PJ61 603 aaPredicted RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 SMAP1Q8IYB5 467 aaPredicted RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 SLC9A2Q9UBY0 812 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 LRWD1Q9UFC0 647 aa11.74□□□□□ -0.53
CDH3-210ENST00000569117 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
CDH3-210ENST00000569117 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 SLC26A4O43511 780 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 CHMP2AO43633 222 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 CCND3P30281 292 aaPredicted RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 MCM4P33991 863 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 CENPFP49454 3210 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 ACTR2P61160 394 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 UBE2HP62256 183 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 TUSC1Q2TAM9 212 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 SLC9C1Q4G0N8 1177 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 TMEM63BQ5T3F8 832 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 RESP18Q5W5W9 173 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 NCAPH2Q6IBW4 605 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 CYFIP1Q7L576 1253 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 MRPS27Q92552 414 aaKnown RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 COPS5Q92905 334 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
CDH3-210ENST00000569117 BCAS3Q9H6U6 928 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 Q9Y3F1 56 aa11.73□□□□□ -0.53
CDH3-210ENST00000569117 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 IGSF9BQ9UPX0 1349 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 KDM3AQ9Y4C1 1321 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 FAM237AA0A1B0GTK4 181 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 EML1O00423 815 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 SPTLC1O15269 473 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 MSCO60682 206 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
CDH3-210ENST00000569117 HOXD8P13378 290 aaPredicted RBP11.72□□□□□ -0.53
CDH3-210ENST00000569117 CMA1P23946 247 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 TXLNAP40222 546 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 ABL2P42684 1182 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 PRSS12P56730 875 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 EPHA7Q15375 998 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 HSDL1Q3SXM5 330 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 MIER3Q7Z3K6 550 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 TLK2Q86UE8 772 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 OR6J1Q8NGC5 347 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 SH3TC2Q8TF17 1288 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 LENG1Q96BZ8 264 aaPredicted RBP11.72□□□□□ -0.53
CDH3-210ENST00000569117 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
CDH3-210ENST00000569117 DISC1Q9NRI5 854 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 TELO2Q9Y4R8 837 aa11.72□□□□□ -0.53
CDH3-210ENST00000569117 SYNRGQ9UMZ2 1314 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 IGKV6D-21A0A0A0MT36 114 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 SORBS3O60504 671 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms