RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 GRIK4Q16099 956 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 NTRK3Q16288 839 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 IER5Q5VY09 327 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 TRIM22Q8IYM9 498 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 REXO1Q8N1G1 1221 aaKnown RBP11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 NME8Q8N427 588 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 ATXN2LQ8WWM7 1075 aaKnown RBP11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 ARNTL2Q8WYA1 636 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 PHKBQ93100 1093 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 CERS4Q9HA82 394 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 SH3GLB2Q9NR46 395 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 UNC80Q8N2C7 3258 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 CDH23Q9H251 3354 aa11.54□□□□□ -0.56
HMGN2P40-201ENST00000566875 MBLAC1A4D2B0 266 aaPredicted RBP11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 RFXAPO00287 272 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 CPLX1O14810 134 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 CHRNA1P02708 482 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 CTSHP09668 335 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 USP11P51784 963 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 NLRP5P59047 1200 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 DEFB103AP81534 67 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 TCTN1Q2MV58 587 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 FAM160B1Q5W0V3 765 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 CCDC148Q8NFR7 591 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 TOP1MTQ969P6 601 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 PCYT2Q99447 389 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 LMCD1Q9NZU5 365 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 TUBE1Q9UJT0 475 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
HMGN2P40-201ENST00000566875 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 BACH1O14867 736 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 HBP1O60381 514 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 CIITAP33076 1130 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 ERVK-21P61565 698 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 IGBP1P78318 339 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 MRPS5P82675 430 aaKnown RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 ITGB3BPQ13352 177 aaPredicted RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 PLCB4Q15147 1175 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 SWSAP1Q6NVH7 229 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 MIS18BP1Q6P0N0 1132 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 FAM117BQ6P1L5 589 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 ABHD15Q6UXT9 468 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 TMCO2Q7Z6W1 182 aaPredicted RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 MYOCDQ8IZQ8 938 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 FAM177A1Q8N128 213 aaPredicted RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 DNAJB3Q8WWF6 145 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 CRYGNQ8WXF5 182 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 TGS1Q96RS0 853 aaKnown RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 SQORQ9Y6N5 450 aa11.52□□□□□ -0.57
HMGN2P40-201ENST00000566875 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 CHD7Q9P2D1 2997 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 ENPP3O14638 875 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 DHX15O43143 795 aaKnown RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 KLRC1P26715 233 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 AAK1Q2M2I8 961 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 NCOA5Q9HCD5 579 aaKnown RBP11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 ZNF302Q9NR11 478 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 PCDHA10Q9Y5I2 948 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 SCN5AQ14524 2016 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 NID2Q14112 1375 aa11.51□□□□□ -0.57
HMGN2P40-201ENST00000566875 KAT6AQ92794 2004 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 IGLV3-22A0A075B6J6 115 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 SMIM35A0A1B0GVV1 85 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 LINC01553A4QN01 128 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 M0QZ92 97 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 DDX39AO00148 427 aaKnown RBP11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
HMGN2P40-201ENST00000566875 UPP2O95045 317 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms