RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLITRK3O94933 977 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 PSAPP07602 524 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 ACLYP53396 1101 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 STK38Q15208 465 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 TMEM266Q2M3C6 531 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 FOXD4L6Q3SYB3 417 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-206ENST00000565990 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-206ENST00000565990 MIS18BP1Q6P0N0 1132 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 FOXD4L3Q6VB84 417 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-206ENST00000565990 MIER3Q7Z3K6 550 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
SF3B3-206ENST00000565990 TMEM87AQ8NBN3 555 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 AK8Q96MA6 479 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 SMARCAD1Q9H4L7 1026 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 LRWD1Q9UFC0 647 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 STK24Q9Y6E0 443 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 EMSYQ7Z589 1322 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 KAT6AQ92794 2004 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 CABYRO75952 493 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 STBD1O95210 358 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 LGALS2P05162 132 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 P4HBP07237 508 aaKnown RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 SPATA31C1P0DKV0 1188 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 COL6A1P12109 1028 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 ATP4AP20648 1035 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 MARCKSP29966 332 aaPredicted RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 LONP1P36776 959 aaKnown RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 SLC26A2P50443 739 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 STAT5BP51692 787 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 GRIN1Q05586 938 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 SWSAP1Q6NVH7 229 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 UBE2Q1Q7Z7E8 422 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 KRI1Q8N9T8 703 aaKnown RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 LEO1Q8WVC0 666 aaPredicted RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 PANK2Q9BZ23 570 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 RAB34Q9BZG1 259 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 RRAGDQ9NQL2 400 aaPredicted RBP14.17□□□□□ -0.14
SF3B3-206ENST00000565990 PCDHA7Q9UN72 937 aa14.17□□□□□ -0.14
SF3B3-206ENST00000565990 DNAH12Q6ZR08 3092 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 POTEMA6NI47 508 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 H3BRB1 525 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 SLC26A4O43511 780 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 CUTAO60888 179 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 LYPLA2O95372 231 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 F2P00734 622 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 MUTP22033 750 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 RPA1P27694 616 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 QARSP47897 775 aaKnown RBP14.16□□□□□ -0.14
SF3B3-206ENST00000565990 SP4Q02446 784 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 CSPP1Q1MSJ5 1256 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 NCAPH2Q6IBW4 605 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 GAS2L3Q86XJ1 694 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 CCDC60Q8IWA6 550 aaPredicted RBP14.16□□□□□ -0.14
SF3B3-206ENST00000565990 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 EIF2AK1Q9BQI3 630 aaKnown RBP14.16□□□□□ -0.14
SF3B3-206ENST00000565990 MTG1Q9BT17 334 aaPredicted RBP14.16□□□□□ -0.14
SF3B3-206ENST00000565990 SEZ6LQ9BYH1 1024 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 CCSER1Q9C0I3 900 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 RNPEPQ9H4A4 650 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
SF3B3-206ENST00000565990 ZNF302Q9NR11 478 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 ERAP1Q9NZ08 941 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 SAMM50Q9Y512 469 aa14.16□□□□□ -0.14
SF3B3-206ENST00000565990 GRIN2DO15399 1336 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 CHMP2AO43633 222 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 NCLP19338 710 aaKnown RBP14.15□□□□□ -0.14
SF3B3-206ENST00000565990 EN2P19622 333 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-206ENST00000565990 PSMC5P62195 406 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 HYIQ5T013 277 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 FAM160B1Q5W0V3 765 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 LRSAM1Q6UWE0 723 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 CXCL17Q6UXB2 119 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 CATSPER3Q86XQ3 398 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 C4orf19Q8IY42 314 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 TNS4Q8IZW8 715 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 KCTD17Q8N5Z5 321 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 SPATA32Q96LK8 384 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 NIFKQ9BYG3 293 aaKnown RBP14.15□□□□□ -0.14
SF3B3-206ENST00000565990 CSRNP2Q9H175 543 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 AZI2Q9H6S1 392 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 TUFT1Q9NNX1 390 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
SF3B3-206ENST00000565990 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.15
SF3B3-206ENST00000565990 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-206ENST00000565990 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 ZNF862O60290 1169 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 DKC1O60832 514 aaKnown RBP eCLIP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms