RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 MYCLP12524 364 aaPredicted RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 GOLGA8FQ08AF8 430 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 GOLGA8DPQ0D2H9 430 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 FSTL1Q12841 308 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 SEMA3FQ13275 785 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 ORC2Q13416 577 aaPredicted RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 CTTNQ14247 550 aaKnown RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 NOL9Q5SY16 702 aaKnown RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 GADL1Q6ZQY3 521 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 SV2BQ7L1I2 683 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 OTOP1Q7RTM1 612 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 CDK5RAP3Q96JB5 506 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 SPSB2Q99619 263 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 SLC39A2Q9NP94 309 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 PRDM9Q9NQV7 894 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 TMOD4Q9NZQ9 345 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 TBC1D7Q9P0N9 293 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 VAV3Q9UKW4 847 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 ADAMTS5Q9UNA0 930 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 TELO2Q9Y4R8 837 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 CSADQ9Y600 493 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 PARP14Q460N5 1801 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 SORBS3O60504 671 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ATP9AO75110 1047 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 SERPINC1P01008 464 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 IDEP14735 1019 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 CDK11BP21127 795 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 CTHP32929 405 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 UBASH3AP57075 661 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ASIC1P78348 528 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD9-217ENST00000565832 LRRC41Q15345 812 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 TMEM119Q4V9L6 283 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ARSHQ5FYA8 562 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ZNF658Q5TYW1 1059 aaPredicted RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 SARM1Q6SZW1 724 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 RNF207Q6ZRF8 634 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 SLFN12Q8IYM2 578 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ENOX1Q8TC92 643 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 PIGOQ8TEQ8 1089 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ZNF526Q8TF50 670 aaPredicted RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 RAD54LQ92698 747 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 KCTD12Q96CX2 325 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 CCDC34Q96HJ3 373 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 C7orf25Q9BPX7 421 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 SH2D3AQ9BRG2 576 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 RAB34Q9BZG1 259 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 RRAGCQ9HB90 399 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 KCNH7Q9NS40 1196 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 RNF146Q9NTX7 359 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 INTS13Q9NVM9 706 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 BTBD7Q9P203 1132 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 WRAP73Q9P2S5 460 aaPredicted RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 IPO5O00410 1097 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 PSMD10O75832 226 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 SLITRK3O94933 977 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ZNF18P17022 549 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ERCC3P19447 782 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 SOX11P35716 441 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 IREB2P48200 963 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 CNTN2Q02246 1040 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 LRCH2Q5VUJ6 765 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 MOXD1Q6UVY6 613 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 TPH2Q8IWU9 490 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 CACTINQ8WUQ7 758 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 NELFBQ8WX92 580 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 PBXIP1Q96AQ6 731 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 OPTNQ96CV9 577 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 FAM20AQ96MK3 541 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 EIF2AK1Q9BQI3 630 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
CHD9-217ENST00000565832 ZNF577Q9BSK1 485 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 TRAIPQ9BWF2 469 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 HOXC10Q9NYD6 342 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 PYCARDQ9ULZ3 195 aa6.95□□□□□ -1.3
CHD9-217ENST00000565832 OTOFQ9HC10 1997 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 PTPRFP10586 1907 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 SFI1A8K8P3 1242 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 TEX33O43247 280 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 TLL1O43897 1013 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 GRIN3BO60391 1043 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 RHOBTB3O94955 611 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 PLA2G4BP0C869 781 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
CHD9-217ENST00000565832 TRAF1Q13077 416 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 NR1H3Q13133 447 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 ITGB3BPQ13352 177 aaPredicted RBP6.94□□□□□ -1.3
CHD9-217ENST00000565832 PGM5Q15124 567 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 MSS51Q4VC12 460 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 MCF2L2Q86YR7 1114 aa6.94□□□□□ -1.3
CHD9-217ENST00000565832 ANKRD13AQ8IZ07 590 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms