RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 EVCP57679 992 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 ACTR2P61160 394 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 KRT40Q6A162 431 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 FAM117BQ6P1L5 589 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 TAF2Q6P1X5 1199 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 RUFY3Q7L099 469 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 REXO1Q8N1G1 1221 aaKnown RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 MICALL1Q8N3F8 863 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 ZBTB10Q96DT7 871 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
CMTM3-209ENST00000565003 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 TUBE1Q9UJT0 475 aa11.44□□□□□ -0.58
CMTM3-209ENST00000565003 DDX39AO00148 427 aaKnown RBP11.43□□□□□ -0.58
CMTM3-209ENST00000565003 CCNE2O96020 404 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 CYP3A4P08684 503 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 IFNAR1P17181 557 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 ZNF76P36508 570 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 IGBP1P78318 339 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 MGAT3Q09327 533 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 NIPA1Q7RTP0 329 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 MYOCDQ8IZQ8 938 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 DNAJB3Q8WWF6 145 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 SEPT8Q92599 483 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 RAD9AQ99638 391 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
CMTM3-209ENST00000565003 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 UPF3BQ9BZI7 483 aaKnown RBP11.43□□□□□ -0.58
CMTM3-209ENST00000565003 AZI2Q9H6S1 392 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 VPS54Q9P1Q0 977 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 MTCH2Q9Y6C9 303 aa11.43□□□□□ -0.58
CMTM3-209ENST00000565003 IGKV6D-21A0A0A0MT36 114 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 LPXNO60711 386 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 ATG7O95352 703 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 AMHP03971 560 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 INSRRP14616 1297 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 POU3F3P20264 500 aaPredicted RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 STAT5BP51692 787 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 AKAP17AQ02040 695 aaKnown RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 GRB10Q13322 594 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 PLPPR4Q7Z2D5 763 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 GDPD5Q8WTR4 605 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 TRAPPC12Q8WVT3 735 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 THEGQ9P2T0 379 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 TRPC6Q9Y210 931 aa11.42□□□□□ -0.58
CMTM3-209ENST00000565003 SPTBN5Q9NRC6 3674 aaKnown RBP11.42□□□□□ -0.58
CMTM3-209ENST00000565003 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 LINC01553A4QN01 128 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 RRN3P2A6NIE6 340 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
CMTM3-209ENST00000565003 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
CMTM3-209ENST00000565003 GHRP10912 638 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 GNA11P29992 359 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 ERVK-21P61565 698 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 HTRA4P83105 476 aaPredicted RBP11.41□□□□□ -0.58
CMTM3-209ENST00000565003 LPIN1Q14693 890 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 ABHD15Q6UXT9 468 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 CCDC60Q8IWA6 550 aaPredicted RBP11.41□□□□□ -0.58
CMTM3-209ENST00000565003 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 APBB2Q92870 758 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 FAM49AQ9H0Q0 323 aaPredicted RBP11.41□□□□□ -0.58
CMTM3-209ENST00000565003 INSL6Q9Y581 213 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 CDY2AQ9Y6F7 541 aa11.41□□□□□ -0.58
CMTM3-209ENST00000565003 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 EDIL3O43854 480 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 MRPS6P82932 125 aaKnown RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 SETQ01105 290 aaPredicted RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 PRR16Q569H4 304 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 FBXO47Q5MNV8 452 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 MCTP2Q6DN12 878 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 RSPH3Q86UC2 560 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 ATXN2LQ8WWM7 1075 aaKnown RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 TOP1MTQ969P6 601 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 LENG9Q96B70 501 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 ASB2Q96Q27 587 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 ZNF577Q9BSK1 485 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 AGO3Q9H9G7 860 aaKnown RBP11.4□□□□□ -0.58
CMTM3-209ENST00000565003 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 PDRG1Q9NUG6 133 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 PPP4R2Q9NY27 417 aa11.4□□□□□ -0.58
CMTM3-209ENST00000565003 CPLX1O14810 134 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms