RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RAD23BP54727 409 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 SEC23AQ15436 765 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 TEX9Q8N6V9 391 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 SDR42E1Q8WUS8 393 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 ESR2Q92731 530 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 PBKQ96KB5 322 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 RNF41Q9H4P4 317 aaPredicted RBP13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 ATRNO75882 1429 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 ZNF131P52739 623 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 SLC18A3Q16572 532 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM83BQ5T0W9 1011 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 RNF220Q5VTB9 566 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 DENND2CQ68D51 928 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 TMEM154Q6P9G4 183 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.265e-6■□□□□ 8.9
SCAMP2-204ENST00000563829 ARHGEF3Q9NR81 526 aa13.45□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM170AA1A519 330 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 TCP11X1B4DZS4 312 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 PHKG2P15735 406 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 COPB2P35606 906 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 GCLCP48506 637 aaPredicted RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 KLHL30Q0D2K2 578 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 BNIP1Q12981 228 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 NUGGCQ68CJ6 796 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 H0Y3Z8 333 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 RNF8O76064 485 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SUN1O94901 812 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 PLTPP55058 493 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SLC29A2Q14542 456 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 FITM2Q8N6M3 262 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ETNK1Q9HBU6 452 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 DLGAP2Q9P1A6 1054 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ATP6V0A2Q9Y487 856 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 LRP6O75581 1613 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SNAP23O00161 211 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 SCG2P13521 617 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 USP11P51784 963 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 ADAM9Q13443 819 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 LSM14BQ9BX40 385 aaKnown RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 TNRQ92752 1358 aa13.44□□□□□ -0.26
SCAMP2-204ENST00000563829 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 MYL1P05976 194 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 GBP1P32455 592 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 RFC5P40937 340 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 RCAN1P53805 252 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 PMS2P54278 862 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 GALNTL6Q49A17 601 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 UBAP2Q5T6F2 1119 aaKnown RBP13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 OTUD6AQ7L8S5 288 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 DYMQ7RTS9 669 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 TRIM74Q86UV6 250 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM114A2Q9NRY5 505 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 CABP4P57796 275 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 PEX26Q7Z412 305 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 CABP7Q86V35 215 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
SCAMP2-204ENST00000563829 PPFIA2O75334 1257 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 ALDH3A1P30838 453 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 TROAPQ12815 778 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 LRRC41Q15345 812 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 INF2Q27J81 1249 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CNNM4Q6P4Q7 775 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 ARHGAP22Q7Z5H3 698 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 RNF25Q96BH1 459 aaPredicted RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 GORASP1Q9BQQ3 440 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 PPP1R12CQ9BZL4 782 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms