RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 STAT5BP51692 787 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 RBL2Q08999 1139 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 GPNMBQ14956 572 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 PLCB4Q15147 1175 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 MARCH8Q5T0T0 291 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 LRCH2Q5VUJ6 765 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 PLPPR4Q7Z2D5 763 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 SERINC5Q86VE9 423 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 AFAP1L1Q8TED9 768 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 SNX21Q969T3 373 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 FOXP1Q9H334 677 aaPredicted RBP9.67□□□□□ -0.86
UBR1-204ENST00000563239 HIPK3Q9H422 1215 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 SETD4Q9NVD3 440 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 ERAP1Q9NZ08 941 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 VAV3Q9UKW4 847 aa9.67□□□□□ -0.86
UBR1-204ENST00000563239 C17orf102A2RUQ5 167 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 EML1O00423 815 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 TREHO43280 583 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 GAS7O60861 476 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 CSF2RAP15509 400 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 CCL23P55773 120 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 KRT76Q01546 638 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 PTK7Q13308 1070 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
UBR1-204ENST00000563239 C9orf50Q5SZB4 431 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 SWSAP1Q6NVH7 229 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 NOSTRINQ8IVI9 506 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 SMAP1Q8IYB5 467 aaPredicted RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 LMBR1Q8WVP7 490 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 GLG1Q92896 1179 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 ZBTB10Q96DT7 871 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 FAM20AQ96MK3 541 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 MTMR9Q96QG7 549 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 LBHD1Q9BQE6 289 aaPredicted RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 TEKT3Q9BXF9 490 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 ZNF215Q9UL58 517 aaPredicted RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 SMC3Q9UQE7 1217 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 PCDHA10Q9Y5I2 948 aa9.66□□□□□ -0.86
UBR1-204ENST00000563239 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
UBR1-204ENST00000563239 TRIOBPQ9H2D6 2365 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 NRCAMQ92823 1304 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 IGSF9BQ9UPX0 1349 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 MBLAC1A4D2B0 266 aaPredicted RBP9.65□□□□□ -0.86
UBR1-204ENST00000563239 ZBTB42B2RXF5 422 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 K7ELQ4 463 aaPredicted RBP9.65□□□□□ -0.86
UBR1-204ENST00000563239 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 TBX3O15119 743 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 ZNF862O60290 1169 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 STBD1O95210 358 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 IQCF3P0C7M6 154 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 CKBP12277 381 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 INSRRP14616 1297 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 FPGSQ05932 587 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 PPP2R5CQ13362 524 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 MBTPS1Q14703 1052 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 SHHQ15465 462 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 GRIK4Q16099 956 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 UGCGQ16739 394 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 RUFY4Q6ZNE9 571 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 C4orf32Q8N8J7 132 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 ATP6V0A1Q93050 837 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 SCLYQ96I15 445 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
UBR1-204ENST00000563239 TMEM60Q9H2L4 133 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 AZI2Q9H6S1 392 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 ZNF302Q9NR11 478 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 DISC1Q9NRI5 854 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 GABBR1Q9UBS5 961 aa9.65□□□□□ -0.86
UBR1-204ENST00000563239 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.65□□□□□ -0.86
UBR1-204ENST00000563239 TRIP12Q14669 1992 aaPredicted RBP9.64□□□□□ -0.87
UBR1-204ENST00000563239 SZT2Q5T011 3432 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 WDR64B1ANS9 1081 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 BACH1O14867 736 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 CHMP2AO43633 222 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 PSAPP07602 524 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 ACRP10323 421 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 ATP2B1P20020 1258 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 SFNP31947 248 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 SLC26A2P50443 739 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 JAK3P52333 1124 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 PPFIA1Q13136 1202 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 NBR1Q14596 966 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 TMEM240Q5SV17 173 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 ZNF618Q5T7W0 954 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 RASIP1Q5U651 963 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 FAM160B1Q5W0V3 765 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 TDHQ8IZJ6 230 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 TMEM199Q8N511 208 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 RDM1Q8NG50 284 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 CAGE1Q8TC20 777 aa9.64□□□□□ -0.87
UBR1-204ENST00000563239 ATP8B4Q8TF62 1192 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms