RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 MCM6Q14566 821 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 ANO6Q4KMQ2 910 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 ABHD15Q6UXT9 468 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 FBXO16Q8IX29 292 aaPredicted RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 MLKLQ8NB16 471 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 NPLOC4Q8TAT6 608 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 ERCC4Q92889 916 aaPredicted RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 ATP6V0A1Q93050 837 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 CCDC47Q96A33 483 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 EMID1Q96A84 441 aaPredicted RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 NAT10Q9H0A0 1025 aaKnown RBP15.55■□□□□ 0.08
CLK3-209ENST00000562670 ABHD16BQ9H3Z7 469 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 SAGE1Q9NXZ1 904 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 DACH1Q9UI36 760 aa15.55■□□□□ 0.08
CLK3-209ENST00000562670 IGKV6D-21A0A0A0MT36 114 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 FRMD3A2A2Y4 597 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 MYMKA6NI61 221 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 E9PMD0 336 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 NKRFO15226 690 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLK3-209ENST00000562670 KLRC4O43908 158 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 SNAI1O95863 264 aaPredicted RBP15.54■□□□□ 0.08
CLK3-209ENST00000562670 CYP11B2P19099 503 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 VEGFBP49765 207 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 MRE11P49959 708 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
CLK3-209ENST00000562670 DPCR1Q3MIW9 517 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 COBLL1Q53SF7 1204 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 CELF3Q5SZQ8 465 aaKnown RBP15.54■□□□□ 0.08
CLK3-209ENST00000562670 TAPT1Q6NXT6 567 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 MIS18BP1Q6P0N0 1132 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 UNC13DQ70J99 1090 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
CLK3-209ENST00000562670 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
CLK3-209ENST00000562670 NRBP1Q9UHY1 535 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 SAMM50Q9Y512 469 aa15.54■□□□□ 0.08
CLK3-209ENST00000562670 ARIH2O95376 493 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 GGPS1O95749 300 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 BMP6P22004 513 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 PPP1R2P41236 205 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 ASIC1P78348 528 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 EHHADHQ08426 723 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 L1TD1Q5T7N2 865 aaKnown RBP15.53■□□□□ 0.08
CLK3-209ENST00000562670 ZNF658Q5TYW1 1059 aaPredicted RBP15.53■□□□□ 0.08
CLK3-209ENST00000562670 CYFIP1Q7L576 1253 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 TPH2Q8IWU9 490 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 DDX12PQ92771 950 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 STAMQ92783 540 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 DNAJC19Q96DA6 116 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 RBSNQ9H1K0 784 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 DNAJC25Q9H1X3 360 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 ANKEF1Q9NU02 776 aa15.53■□□□□ 0.08
CLK3-209ENST00000562670 EMSYQ7Z589 1322 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 BIN1O00499 593 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 CASP1P29466 404 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 ZNF165P49910 485 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 PSMC6P62333 389 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 SP3Q02447 781 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 UVSSAQ2YD98 709 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 C11orf57Q6ZUT1 292 aaPredicted RBP15.52■□□□□ 0.08
CLK3-209ENST00000562670 EEPD1Q7L9B9 569 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 GPBP1Q86WP2 473 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 TRMT44Q8IYL2 757 aaKnown RBP15.52■□□□□ 0.08
CLK3-209ENST00000562670 BANK1Q8NDB2 785 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 BHMT2Q9H2M3 363 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 GRPEL1Q9HAV7 217 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 RNF186Q9NXI6 227 aa15.52■□□□□ 0.08
CLK3-209ENST00000562670 MAFBQ9Y5Q3 323 aaPredicted RBP15.52■□□□□ 0.08
CLK3-209ENST00000562670 WDR81Q562E7 1941 aa15.52■□□□□ 0.07
CLK3-209ENST00000562670 DOCK5Q9H7D0 1870 aa15.52■□□□□ 0.07
CLK3-209ENST00000562670 LGR5O75473 907 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 GNRH1P01148 92 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
CLK3-209ENST00000562670 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 ERCC5P28715 1186 aaPredicted RBP15.51■□□□□ 0.07
CLK3-209ENST00000562670 CTGFP29279 349 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 YWHABP31946 246 aaKnown RBP15.51■□□□□ 0.07
CLK3-209ENST00000562670 PSMC4P43686 418 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 PSMD2Q13200 908 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 ACVR2BQ13705 512 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 LAMC2Q13753 1193 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 KIF22Q14807 665 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 UGCGQ16739 394 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 KMT5BQ4FZB7 885 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 ARSHQ5FYA8 562 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 IQSEC1Q6DN90 963 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 CCDC60Q8IWA6 550 aaPredicted RBP15.51■□□□□ 0.07
CLK3-209ENST00000562670 SEPT1Q8WYJ6 367 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 TRIM47Q96LD4 638 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 MLXIPQ9HAP2 919 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 EXOC1Q9NV70 894 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 PPME1Q9Y570 386 aa15.51■□□□□ 0.07
CLK3-209ENST00000562670 ARID2Q68CP9 1835 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 IKBKBO14920 756 aa15.5■□□□□ 0.07
CLK3-209ENST00000562670 GH1P01241 217 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms