RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 GJB5O95377 273 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 AOC1P19801 751 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 TGM1P22735 817 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 RFC2P35250 354 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 RGS3P49796 1198 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 RRP1P56182 461 aaKnown RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 WDR5P61964 334 aaKnown RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 CHAF1AQ13111 956 aaPredicted RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 NFE2L2Q16236 605 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 GDF6Q6KF10 455 aaPredicted RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 LBX2Q6XYB7 198 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 RPGRIP1Q96KN7 1286 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 BBC3Q96PG8 261 aaPredicted RBP7.44□□□□□ -1.22
TCF4-213ENST00000562543 RAD9AQ99638 391 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 IDI2Q9BXS1 227 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 SLC5A4Q9NY91 659 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
TCF4-213ENST00000562543 AKAP13Q12802 2813 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 MYH13Q9UKX3 1938 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L15C9J2P7 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L10C9JJH3 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L13C9JLJ4 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L12C9JPN9 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L11C9JVI0 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L21D6R901 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L18D6R9N7 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L22D6RA61 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L17D6RBQ6 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L19D6RCP7 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L20D6RJB6 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 H3BNC9 293 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 PI15O43692 258 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 B4GALT4O60513 344 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 BRD1O95696 1058 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 SSTR4P31391 388 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 CAP2P40123 477 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 KCNJ6P48051 423 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 DEFB103AP81534 67 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 USP17L24Q0WX57 530 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 RRP1BQ14684 758 aaKnown RBP7.43□□□□□ -1.22
TCF4-213ENST00000562543 N4BP2L1Q5TBK1 243 aaPredicted RBP7.43□□□□□ -1.22
TCF4-213ENST00000562543 RGL4Q8IZJ4 473 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 CMTR1Q8N1G2 835 aaKnown RBP7.43□□□□□ -1.22
TCF4-213ENST00000562543 KREMEN2Q8NCW0 462 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 NSUN5Q96P11 429 aaKnown RBP7.43□□□□□ -1.22
TCF4-213ENST00000562543 POLR3GLQ9BT43 218 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 TRPV6Q9H1D0 765 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 INCENPQ9NQS7 918 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 NCDNQ9UBB6 729 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 MYO10Q9HD67 2058 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 KIF16BQ96L93 1317 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 KALRNO60229 2985 aa7.43□□□□□ -1.22
TCF4-213ENST00000562543 FAM196BA6NMK8 535 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 C19orf81C9J6K1 198 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 LINC01565O15544 149 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 DUSP11O75319 330 aaKnown RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
TCF4-213ENST00000562543 COASYQ13057 564 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 GPM6BQ13491 265 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.221e-6■■■□□ 15.3
TCF4-213ENST00000562543 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 NETO1Q8TDF5 533 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 TTC9Q92623 222 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 UPF3AQ9H1J1 476 aaKnown RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 MFSD1Q9H3U5 465 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 USP40Q9NVE5 1235 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 TLR7Q9NYK1 1049 aaKnown RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 KNSTRNQ9Y448 316 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 USP15Q9Y4E8 981 aaPredicted RBP7.42□□□□□ -1.22
TCF4-213ENST00000562543 GRIN2DO15399 1336 aa7.42□□□□□ -1.22
TCF4-213ENST00000562543 FREM2Q5SZK8 3169 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 CTAGE5O15320 804 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 XYLBO75191 536 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 ATF7P17544 494 aaPredicted RBP7.41□□□□□ -1.22
TCF4-213ENST00000562543 FSTP19883 344 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 WEE1P30291 646 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 SAMD11Q96NU1 681 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 PLA2G12BQ9BX93 195 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 MOV10L1Q9BXT6 1211 aaKnown RBP7.41□□□□□ -1.22
TCF4-213ENST00000562543 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 PCMTD2Q9NV79 361 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 HYPKQ9NX55 129 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 CLEC1BQ9P126 229 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 SORCS3Q9UPU3 1222 aa7.41□□□□□ -1.22
TCF4-213ENST00000562543 SIPA1L1O43166 1804 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms