RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 VMACQ2NL98 169 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 SDE2Q6IQ49 451 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 TEX2Q8IWB9 1127 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 CRACR2BQ8N4Y2 399 aaPredicted RBP5.65□□□□□ -1.5
TMOD3-207ENST00000560549 GPATCH3Q96I76 525 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 SLC12A5Q9H2X9 1139 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 MARCH2Q9P0N8 246 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.65□□□□□ -1.5
TMOD3-207ENST00000560549 KNSTRNQ9Y448 316 aa5.65□□□□□ -1.5
TMOD3-207ENST00000560549 SETBP1Q9Y6X0 1596 aa5.65□□□□□ -1.51
TMOD3-207ENST00000560549 KIF1BO60333 1816 aa5.65□□□□□ -1.51
TMOD3-207ENST00000560549 A0A1W2PQU0 124 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ADCY3O60266 1144 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 RAB11FIP3O75154 756 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 FUCA1P04066 466 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 NTRK1P04629 796 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 SNRPB2P08579 225 aaKnown RBP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ECI1P42126 302 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 PPP2R2AP63151 447 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 TMEM145Q8NBT3 493 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ST13P5Q8NFI4 369 aaPredicted RBP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 STK26Q9P289 416 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 NUDCQ9Y266 331 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ASXL1Q8IXJ9 1541 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 PPLO60437 1756 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 STRCQ7RTU9 1775 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 NCANO14594 1321 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 RNF123Q5XPI4 1314 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ZFYVE9O95405 1425 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 NPHS1O60500 1241 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 ASGR2P07307 311 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 AFF3P51826 1226 aaKnown RBP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 SAFB2Q14151 953 aaKnown RBP eCLIP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 RCBTB1Q8NDN9 531 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 SH3TC2Q8TF17 1288 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
TMOD3-207ENST00000560549 LRP2BPQ9P2M1 347 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 PFDN2Q9UHV9 154 aa5.64□□□□□ -1.51
TMOD3-207ENST00000560549 NPC1L1Q9UHC9 1359 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 MYOM1P52179 1685 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 TMEM131LA2VDJ0 1609 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 UBR1Q8IWV7 1749 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 A0A0G2JLL6 359 aaPredicted RBP5.63□□□□□ -1.51
TMOD3-207ENST00000560549 PMLP29590 882 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 HOXC12P31275 282 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 MTERF2Q49AM1 385 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 SLC35F1Q5T1Q4 408 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 CNKSR3Q6P9H4 555 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 EEPD1Q7L9B9 569 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 THEMISQ8N1K5 641 aaPredicted RBP5.63□□□□□ -1.51
TMOD3-207ENST00000560549 Q8N1Y9 231 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 NETO2Q8NC67 525 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 TSPAN17Q96FV3 270 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 XYLT2Q9H1B5 865 aa5.63□□□□□ -1.51
TMOD3-207ENST00000560549 BLMP54132 1417 aaPredicted RBP5.62□□□□□ -1.51
TMOD3-207ENST00000560549 KDM5AP29375 1690 aaKnown RBP5.62□□□□□ -1.51
TMOD3-207ENST00000560549 TRBV23OR9-2A0A075B6M9 112 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 ENPP3O14638 875 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 PRRG2O14669 202 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 TOM1O60784 492 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 BMP7P18075 431 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 TESK1Q15569 626 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 PPIL6Q8IXY8 311 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 TP53I13Q8NBR0 393 aaPredicted RBP5.62□□□□□ -1.51
TMOD3-207ENST00000560549 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 ARHGEF4Q9NR80 690 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 TULP4Q9NRJ4 1543 aa5.62□□□□□ -1.51
TMOD3-207ENST00000560549 INSRP06213 1382 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 ESYT3A0FGR9 886 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 SGSM2O43147 1006 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 BCL6P41182 706 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 CTSWP56202 376 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 DLX2Q07687 328 aaPredicted RBP5.61□□□□□ -1.51
TMOD3-207ENST00000560549 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 C2orf27AQ580R0 203 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 ACBD5Q5T8D3 534 aaPredicted RBP5.61□□□□□ -1.51
TMOD3-207ENST00000560549 FOXB2Q5VYV0 432 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 E4F1Q66K89 784 aaPredicted RBP5.61□□□□□ -1.51
TMOD3-207ENST00000560549 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 ALG3Q92685 438 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 DIO2Q92813 273 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 ZNF669Q96BR6 464 aaPredicted RBP5.61□□□□□ -1.51
TMOD3-207ENST00000560549 PWWP2AQ96N64 755 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 PRAM1Q96QH2 718 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 RTEL1Q9NZ71 1219 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
TMOD3-207ENST00000560549 NSD3Q9BZ95 1437 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 RIMS2Q9UQ26 1411 aa5.61□□□□□ -1.51
TMOD3-207ENST00000560549 MYO5BQ9ULV0 1848 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 PLEKHH1Q9ULM0 1364 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 C22orf46C9J442 243 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 FFAR3O14843 346 aa5.6□□□□□ -1.51
TMOD3-207ENST00000560549 MEFVO15553 781 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms