RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 RGL3Q3MIN7 710 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 TMEM177Q53S58 311 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 ZCCHC8Q6NZY4 707 aaKnown RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 C16orf86Q6ZW13 317 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 NOSTRINQ8IVI9 506 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 TXNDC5Q8NBS9 432 aaKnown RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 IGDCC4Q8TDY8 1250 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 L2HGDHQ9H9P8 463 aa5.47□□□□□ -1.53
VPS13C-207ENST00000558919 INTS7Q9NVH2 962 aaKnown RBP5.47□□□□□ -1.53
VPS13C-207ENST00000558919 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 MROH6A6NGR9 719 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 OPA1O60313 960 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 FLT3P36888 993 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 CTSWP56202 376 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 ARHGAP44Q17R89 818 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 MCTP2Q6DN12 878 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 LILRA6Q6PI73 481 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 OTOP1Q7RTM1 612 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 ZDHHC14Q8IZN3 488 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 C2orf69Q8N8R5 385 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 ZCCHC14Q8WYQ9 949 aaKnown RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 YTHDC1Q96MU7 727 aaKnown RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 TEPSINQ96N21 525 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 FANCLQ9NW38 375 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 ARHGAP20Q9P2F6 1191 aa5.46□□□□□ -1.54
VPS13C-207ENST00000558919 TNPO3Q9Y5L0 923 aaKnown RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 MRPL42Q9Y6G3 142 aaKnown RBP5.46□□□□□ -1.54
VPS13C-207ENST00000558919 SCDO00767 359 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 KCNK3O14649 394 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 FBXO21O94952 628 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 COL6A1P12109 1028 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 SDSP20132 328 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
VPS13C-207ENST00000558919 NFIXQ14938 502 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 TRMT10BQ6PF06 316 aaKnown RBP5.45□□□□□ -1.54
VPS13C-207ENST00000558919 FAM124AQ86V42 546 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 JAZF1Q86VZ6 243 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 DLG3Q92796 817 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 LCORQ96JN0 433 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-207ENST00000558919 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 SLC39A2Q9NP94 309 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 KCND1Q9NSA2 647 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 SAMD15Q9P1V8 674 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 ARHGAP28Q9P2N2 729 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 MAGEC2Q9UBF1 373 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-207ENST00000558919 FTSJ1Q9UET6 329 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 ZFP69BQ9UJL9 534 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 B3GALT1Q9Y5Z6 326 aa5.45□□□□□ -1.54
VPS13C-207ENST00000558919 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 M0R2C6 588 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 HIP1RO75146 1068 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 CDC45O75419 566 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 KNG1P01042 644 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 CYP1A1P04798 512 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-207ENST00000558919 PTGS1P23219 599 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 AOAHP28039 575 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 SDHAP31040 664 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 GLRBP48167 497 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 SEC23AQ15436 765 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 CPZQ66K79 652 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 DPP8Q6V1X1 898 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-207ENST00000558919 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-207ENST00000558919 CXorf38Q8TB03 319 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 NINJ1Q92982 152 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 BOCQ9BWV1 1114 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 CD2APQ9Y5K6 639 aa5.44□□□□□ -1.54
VPS13C-207ENST00000558919 ENPP3O14638 875 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 GLRX3O76003 335 aaKnown RBP5.43□□□□□ -1.54
VPS13C-207ENST00000558919 IL18BPO95998 194 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 ZBTB48P10074 688 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-207ENST00000558919 IRF9Q00978 393 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 ZNF460Q14592 562 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 TKFCQ3LXA3 575 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 PHF19Q5T6S3 580 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 BORAQ6PGQ7 559 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 LGI4Q8N135 537 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 KLHL36Q8N4N3 616 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 STPG3Q8N7X2 389 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 CHST14Q8NCH0 376 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 RELTQ969Z4 430 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 WNK4Q96J92 1243 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 FEZ1Q99689 392 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 ORAI3Q9BRQ5 295 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 ADAM7Q9H2U9 754 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 CABP5Q9NP86 173 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 GALNT8Q9NY28 637 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 BTBD7Q9P203 1132 aa5.43□□□□□ -1.54
VPS13C-207ENST00000558919 TRAF5O00463 557 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 KLHL18O94889 574 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 JMJD7P0C870 316 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 NFATC3Q12968 1075 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 CFAP100Q494V2 611 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 TM4SF20Q53R12 229 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 PIK3R6Q5UE93 754 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms