RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GPRC5CQ9NQ84 441 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 CHST7Q9NS84 486 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 PRR13Q9NZ81 148 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 COQ6Q9Y2Z9 468 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 ZFHX4Q86UP3 3567 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 RASSF10A6NK89 507 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 VSTM5A8MXK1 200 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 DHX15O43143 795 aaKnown RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 SNUPNO95149 360 aaKnown RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 CD3EP07766 207 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 SSTR4P31391 388 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 LSSP48449 732 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 USP11P51784 963 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 POU4F1Q01851 419 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 ANKRD34AQ69YU3 496 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 CXorf57Q6NSI4 855 aaKnown RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 C11orf74Q86VG3 221 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 FRS2Q8WU20 508 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 ZFYVE21Q9BQ24 234 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 CEP41Q9BYV8 373 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 ACSS3Q9H6R3 686 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 VTA1Q9NP79 307 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 EMC7Q9NPA0 242 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 SPTLC3Q9NUV7 552 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 OBP2AQ9NY56 170 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 STOML1Q9UBI4 398 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 STXBP5LQ9Y2K9 1186 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 LMTK2Q8IWU2 1503 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 TECPR2O15040 1411 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 RRBP1Q9P2E9 1410 aaKnown RBP6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 BDP1A6H8Y1 2624 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 PNPLA7Q6ZV29 1317 aa6.23□□□□□ -1.41
MTHFD1-216ENST00000557539 LRPPRCP42704 1394 aaKnown RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 ARVCFO00192 962 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 TRAF5O00463 557 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 MEFVO15553 781 aaPredicted RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 CA12O43570 354 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 MSCO60682 206 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 ULK1O75385 1050 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 KRT37O76014 449 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 PRAMEF1O95521 474 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 TGFB1P01137 390 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 PDE6BP35913 854 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 CD97P48960 835 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 GRM1Q13255 1194 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 UVSSAQ2YD98 709 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 CWF19L1Q69YN2 538 aaKnown RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 RSPO2Q6UXX9 243 aaPredicted RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 ZDHHC13Q8IUH4 622 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 NPLOC4Q8TAT6 608 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 AHCYL2Q96HN2 611 aaKnown RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 MYRFLQ96LU7 910 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 C7orf69Q9H7B7 122 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 PRDM16Q9HAZ2 1276 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 RNF181Q9P0P0 153 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 TMEFF2Q9UIK5 374 aaPredicted RBP6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 ST14Q9Y5Y6 855 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 OVOS2A0A0G2JMS6 1433 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 OVOS2A0A0J9YW53 1432 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 OVOS2Q6IE36 1432 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 ADAMTS13Q76LX8 1427 aa6.22□□□□□ -1.41
MTHFD1-216ENST00000557539 LAMB4A4D0S4 1761 aa6.21□□□□□ -1.41
MTHFD1-216ENST00000557539 CENPFP49454 3210 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 HMX2A2RU54 273 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 C2orf71A6NGG8 1288 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 CKMP06732 381 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PF4V1P10720 104 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 ATP2A2P16615 1042 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 CYP7A1P22680 504 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 GRIK1P39086 918 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PREPP48147 710 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 DNM2P50570 870 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 KPNA1P52294 538 aaPredicted RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 OCRLQ01968 901 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 FAPQ12884 760 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PAK1Q13153 545 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PCBP2Q15366 365 aaKnown RBP eCLIP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 TMEM177Q53S58 311 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 ACBD5Q5T8D3 534 aaPredicted RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 CRTC3Q6UUV7 619 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PCDH19Q8TAB3 1148 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 COPS5Q92905 334 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 TIFAQ96CG3 184 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 IL17RAQ96F46 866 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 ZNF700Q9H0M5 742 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 ASCC2Q9H1I8 757 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms