RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ARHGEF18Q6ZSZ5 1173 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 OSTM1Q86WC4 334 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
PRPF39-209ENST00000556353 TTC9BQ8N6N2 239 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 MKL1Q969V6 931 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 DNAJC7Q99615 494 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 GPR20Q99678 358 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 KCND1Q9NSA2 647 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 PPP4R1LQ9P1A2 415 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 NDOR1Q9UHB4 597 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 CBLCQ9ULV8 474 aa7.74□□□□□ -1.17
PRPF39-209ENST00000556353 CCDC66A2RUB6 948 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 FAM90A27PA6NNH2 459 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 MAN2B1O00754 1011 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 B4GALT4O60513 344 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 EFCAB14O75071 495 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 AMY2AP04746 511 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 AMY2BP19961 511 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 GJA4P35212 333 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 DNM2P50570 870 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 PPP2CBP62714 309 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 PPP2CAP67775 309 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 DBPQ10586 325 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-209ENST00000556353 Q6ZUG5 572 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 LIMS2Q7Z4I7 341 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 CHST13Q8NET6 341 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 PMFBP1Q8TBY8 1022 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 SSBP3Q9BWW4 388 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-209ENST00000556353 SLC39A2Q9NP94 309 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 JADE2Q9NQC1 790 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
PRPF39-209ENST00000556353 NPEPPSL1A6NEC2 478 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 H0Y858 1186 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 EPHB4P54760 987 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 JAM2P57087 298 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 ADAM17P78536 824 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 ZXDCQ2QGD7 858 aaPredicted RBP7.72□□□□□ -1.17
PRPF39-209ENST00000556353 RALYLQ86SE5 291 aaKnown RBP7.72□□□□□ -1.17
PRPF39-209ENST00000556353 GGNQ86UU5 652 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 ZSWIM2Q8NEG5 633 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 C8orf49Q96NF6 230 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
PRPF39-209ENST00000556353 SLC52A2Q9HAB3 445 aa7.72□□□□□ -1.17
PRPF39-209ENST00000556353 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.71□□□□□ -1.18
PRPF39-209ENST00000556353 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
PRPF39-209ENST00000556353 IL18BPO95998 194 aa7.71□□□□□ -1.18
PRPF39-209ENST00000556353 AJUBAQ96IF1 538 aa7.71□□□□□ -1.18
PRPF39-209ENST00000556353 MAGEB10Q96LZ2 347 aaPredicted RBP7.71□□□□□ -1.18
PRPF39-209ENST00000556353 JAG2Q9Y219 1238 aa7.71□□□□□ -1.18
PRPF39-209ENST00000556353 CCDC163A0A0D9SF12 145 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.7□□□□□ -1.18
PRPF39-209ENST00000556353 INSRRP14616 1297 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 CPZQ66K79 652 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 DPP8Q6V1X1 898 aaPredicted RBP7.7□□□□□ -1.18
PRPF39-209ENST00000556353 REXO1L1PQ8IX06 675 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 GSTCDQ8NEC7 633 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 THAP3Q8WTV1 239 aaPredicted RBP7.7□□□□□ -1.18
PRPF39-209ENST00000556353 SMURF1Q9HCE7 757 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 SFMBT1Q9UHJ3 866 aa7.7□□□□□ -1.18
PRPF39-209ENST00000556353 PRAMEF25A6NGN4 478 aa7.69□□□□□ -1.18
PRPF39-209ENST00000556353 LACTBP83111 547 aaPredicted RBP7.69□□□□□ -1.18
PRPF39-209ENST00000556353 SLFN13Q68D06 897 aa7.69□□□□□ -1.18
PRPF39-209ENST00000556353 CIR1Q86X95 450 aaPredicted RBP7.69□□□□□ -1.18
PRPF39-209ENST00000556353 JMYQ8N9B5 988 aa7.69□□□□□ -1.18
PRPF39-209ENST00000556353 MYRFQ9Y2G1 1151 aa7.69□□□□□ -1.18
PRPF39-209ENST00000556353 KCNK3O14649 394 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 CLASP2O75122 1294 aaKnown RBP7.68□□□□□ -1.18
PRPF39-209ENST00000556353 RASGRP1O95267 797 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 CSF2RBP32927 897 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 TRIM61Q5EBN2 209 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 GPR155Q7Z3F1 870 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 CISD2Q8N5K1 135 aaKnown RBP7.68□□□□□ -1.18
PRPF39-209ENST00000556353 SLC7A14Q8TBB6 771 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 DNAJC2Q99543 621 aaKnown RBP7.68□□□□□ -1.18
PRPF39-209ENST00000556353 C1QTNF3Q9BXJ4 246 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 KATNBL1Q9H079 304 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 ST6GALNAC2Q9UJ37 374 aa7.68□□□□□ -1.18
PRPF39-209ENST00000556353 GPR42O15529 346 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 C4BPAP04003 597 aaKnown RBP7.67□□□□□ -1.18
PRPF39-209ENST00000556353 ZNF20P17024 532 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 PTGS1P23219 599 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 HERVK_113P62684 666 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 PUM1Q14671 1186 aaKnown RBP eCLIP7.67□□□□□ -1.18
PRPF39-209ENST00000556353 C2orf27AQ580R0 203 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
PRPF39-209ENST00000556353 KRTAP3-1Q9BYR8 98 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 INCENPQ9NQS7 918 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 COQ6Q9Y2Z9 468 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 PTCH2Q9Y6C5 1203 aa7.67□□□□□ -1.18
PRPF39-209ENST00000556353 ESYT3A0FGR9 886 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 CUTAO60888 179 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 AOAHP28039 575 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 POLD1P28340 1107 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 USP10Q14694 798 aaKnown RBP7.66□□□□□ -1.18
PRPF39-209ENST00000556353 WDR72Q3MJ13 1102 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 ZNF568Q3ZCX4 644 aa7.66□□□□□ -1.18
PRPF39-209ENST00000556353 SREK1Q8WXA9 508 aaKnown RBP7.66□□□□□ -1.18
PRPF39-209ENST00000556353 DVL3Q92997 716 aaPredicted RBP7.66□□□□□ -1.18
PRPF39-209ENST00000556353 PTPN18Q99952 460 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms