RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZSCAN20P17040 1043 aaPredicted RBP26.81■■□□□ 1.88
TMEM260-207ENST00000555497 PRELPP51888 382 aa26.81■■□□□ 1.88
TMEM260-207ENST00000555497 KNOP1Q1ED39 458 aaKnown RBP26.81■■□□□ 1.88
TMEM260-207ENST00000555497 NEK11Q8NG66 645 aa26.81■■□□□ 1.88
TMEM260-207ENST00000555497 CLEC4DQ8WXI8 215 aa26.81■■□□□ 1.88
TMEM260-207ENST00000555497 UNC45AQ9H3U1 944 aa26.81■■□□□ 1.88
TMEM260-207ENST00000555497 TRAF3IP3Q9Y228 551 aa26.81■■□□□ 1.88
TMEM260-207ENST00000555497 APBA1Q02410 837 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 PPP4R3CPQ6ZMV5 832 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 SAMD7Q7Z3H4 446 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 CCDC42Q96M95 316 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 ZNF577Q9BSK1 485 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 EHMT1Q9H9B1 1298 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.8■■□□□ 1.88
TMEM260-207ENST00000555497 NR2F2P24468 414 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 PDXDC1Q6P996 788 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 CRACR2AQ9BSW2 395 aa26.8■■□□□ 1.88
TMEM260-207ENST00000555497 EIF4A3P38919 411 aaKnown RBP26.79■■□□□ 1.88
TMEM260-207ENST00000555497 KCNA1Q09470 495 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 B3GNT9Q6UX72 402 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 C1orf186Q6ZWK4 172 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 PRPF38AQ8NAV1 312 aaKnown RBP26.79■■□□□ 1.88
TMEM260-207ENST00000555497 IL31RAQ8NI17 732 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 HOOK2Q96ED9 719 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 OGFRQ9NZT2 677 aa26.79■■□□□ 1.88
TMEM260-207ENST00000555497 PPP1R1BQ9UD71 204 aaPredicted RBP26.79■■□□□ 1.88
TMEM260-207ENST00000555497 CETN3O15182 167 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 ITGB5P18084 799 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 CHMP4BP1P59074 171 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 GOLGA1Q92805 767 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 WDR46O15213 610 aaKnown RBP26.78■■□□□ 1.88
TMEM260-207ENST00000555497 TUBB2AQ13885 445 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 GPR161Q8N6U8 529 aaKnown RBP26.78■■□□□ 1.88
TMEM260-207ENST00000555497 RABGGTAQ92696 567 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 MXRA8Q9BRK3 442 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 TUBB2BQ9BVA1 445 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 LSM14BQ9BX40 385 aaKnown RBP26.78■■□□□ 1.88
TMEM260-207ENST00000555497 KIAA1683Q9H0B3 1180 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 NLRC4Q9NPP4 1024 aa26.78■■□□□ 1.88
TMEM260-207ENST00000555497 ENC1O14682 589 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 TBCAO75347 108 aaKnown RBP26.77■■□□□ 1.88
TMEM260-207ENST00000555497 GMPSP49915 693 aaPredicted RBP26.77■■□□□ 1.88
TMEM260-207ENST00000555497 BMT2Q1RMZ1 405 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 MICALL2Q8IY33 904 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 CPXCR1Q8N123 301 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 KCTD17Q8N5Z5 321 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 EDEM3Q9BZQ6 932 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 HDAC6Q9UBN7 1215 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 KRT86O43790 486 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 KIF11P52732 1056 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 VAV2P52735 878 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 TBC1D10BQ4KMP7 808 aaPredicted RBP26.77■■□□□ 1.88
TMEM260-207ENST00000555497 PURBQ96QR8 312 aaKnown RBP26.77■■□□□ 1.88
TMEM260-207ENST00000555497 IKZF4Q9H2S9 585 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 RAVER2Q9HCJ3 691 aaKnown RBP26.77■■□□□ 1.88
TMEM260-207ENST00000555497 ASTN1O14525 1302 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 RPTORQ8N122 1335 aa26.77■■□□□ 1.88
TMEM260-207ENST00000555497 IPO5O00410 1097 aaKnown RBP26.76■■□□□ 1.87
TMEM260-207ENST00000555497 PDXKO00764 312 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 IPO7O95373 1038 aaKnown RBP26.76■■□□□ 1.87
TMEM260-207ENST00000555497 GCNT3O95395 438 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 TNFAIP1Q13829 316 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 MUM1L1Q5H9M0 696 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 CACNA2D4Q7Z3S7 1137 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 CEP112Q8N8E3 955 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 FAM53CQ9NYF3 392 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 MYO6Q9UM54 1294 aa26.76■■□□□ 1.87
TMEM260-207ENST00000555497 SETQ01105 290 aaPredicted RBP26.75■■□□□ 1.87
TMEM260-207ENST00000555497 KCNH2Q12809 1159 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 HGSNATQ68CP4 663 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 LPAR1Q92633 364 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 PARD6BQ9BYG5 372 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 WDR11Q9BZH6 1224 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 CEP72Q9P209 647 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 TLR2O60603 784 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 LCA5LO95447 670 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 ATP1A1P05023 1023 aaKnown RBP26.75■■□□□ 1.87
TMEM260-207ENST00000555497 RPS12P25398 132 aaKnown RBP26.75■■□□□ 1.87
TMEM260-207ENST00000555497 NMT1P30419 496 aaKnown RBP26.75■■□□□ 1.87
TMEM260-207ENST00000555497 RASSF7Q02833 373 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 TEKT3Q9BXF9 490 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 OLFML3Q9NRN5 406 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 PKD2L1Q9P0L9 805 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 HACL1Q9UJ83 578 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 FAM184BQ9ULE4 1060 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 PCDHA13Q9Y5I0 950 aa26.75■■□□□ 1.87
TMEM260-207ENST00000555497 DDX39AO00148 427 aaKnown RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 CTNND1O60716 968 aaKnown RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 ALAS1P13196 640 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 EPHA7Q15375 998 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 SPA17Q15506 151 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 ASTE1Q2TB18 679 aaPredicted RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 NBPF12Q5TAG4 269 aaPredicted RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 TRAPPC11Q7Z392 1133 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 SLC38A10Q9HBR0 1119 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 HOMER2Q9NSB8 354 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 AKAP3O75969 853 aa26.74■■□□□ 1.87
TMEM260-207ENST00000555497 POLR2FP61218 127 aaKnown RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 TYW1Q9NV66 732 aaKnown RBP26.74■■□□□ 1.87
TMEM260-207ENST00000555497 BCS1LQ9Y276 419 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms