RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NUP43Q8NFH3 380 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF622Q969S3 477 aaKnown RBP eCLIP4.3□□□□□ -1.72
SLIRP-202ENST00000553981 PHACTR3Q96KR7 559 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 PWWP2AQ96N64 755 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 CDADC1Q9BWV3 514 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 MKRN2Q9H000 416 aaKnown RBP4.3□□□□□ -1.72
SLIRP-202ENST00000553981 GFOD1Q9NXC2 390 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 ACSL6Q9UKU0 697 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 ABCC12Q96J65 1359 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 THSD7BQ9C0I4 1608 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 RNF123Q5XPI4 1314 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 LTBP3Q9NS15 1303 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 PCNTO95613 3336 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 A0A1W2PQ45 241 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 A0A1W2PQY0 241 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 SHTN1A0MZ66 631 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 KLRG2A4D1S0 409 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 BUB1BO60566 1050 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 VAV1P15498 845 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 NME1P15531 152 aaKnown RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 NCKAP1LP55160 1127 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 CYP4F8P98187 520 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 CBX2Q14781 532 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 C1orf141Q5JVX7 400 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 CST9Q5W186 159 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 RPTNQ6XPR3 784 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 GK5Q6ZS86 529 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 TMEM52Q8NDY8 209 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF296Q8WUU4 475 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 SLC6A18Q96N87 628 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 BRIP1Q9BX63 1249 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 ADAM7Q9H2U9 754 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 ANTXR1Q9H6X2 564 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 LUC7LQ9NQ29 371 aaKnown RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-202ENST00000553981 AP5S1Q9NUS5 200 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 FBXL21Q9UKT6 434 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 PCDHB12Q9Y5F1 795 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 SCN4AP35499 1836 aa4.29□□□□□ -1.72
SLIRP-202ENST00000553981 CEMIPQ8WUJ3 1361 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 RASSF10A6NK89 507 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 H0YIN7 160 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 FZD9O00144 591 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 TRAF5O00463 557 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 TNFRSF10CO14798 259 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 AUHQ13825 339 aaKnown RBP4.28□□□□□ -1.72
SLIRP-202ENST00000553981 DCTN1Q14203 1278 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 SEZ6Q53EL9 994 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF790Q6PG37 636 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 CRTC3Q6UUV7 619 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 GGNQ86UU5 652 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 MORC1Q86VD1 984 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 REXO1Q8N1G1 1221 aaKnown RBP4.28□□□□□ -1.72
SLIRP-202ENST00000553981 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 TEPSINQ96N21 525 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 JMJD8Q96S16 334 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 UBP1Q9NZI7 540 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 IMPACTQ9P2X3 320 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 ADAMTS1Q9UHI8 967 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 TAF1P21675 1872 aa4.28□□□□□ -1.72
SLIRP-202ENST00000553981 KIF7Q2M1P5 1343 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 IRS2Q9Y4H2 1338 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 ZC3H12DA2A288 527 aaKnown RBP4.27□□□□□ -1.73
SLIRP-202ENST00000553981 MEIS3P2A8K0S8 358 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 MSL3P1P0C860 447 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 IGFBP6P24592 240 aaPredicted RBP4.27□□□□□ -1.73
SLIRP-202ENST00000553981 IL6STP40189 918 aaPredicted RBP4.27□□□□□ -1.73
SLIRP-202ENST00000553981 EPS15P42566 896 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 RGS19P49795 217 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 MVKQ03426 396 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 PLEKHN1Q494U1 663 aaPredicted RBP4.27□□□□□ -1.73
SLIRP-202ENST00000553981 RTP2Q5QGT7 225 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 ERICH6BQ5W0A0 696 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 STYK1Q6J9G0 422 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 CYP4F22Q6NT55 531 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 CNTROBQ8N137 903 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 SYNE4Q8N205 404 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 SLC9A7Q96T83 725 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 TAOK3Q9H2K8 898 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 MIS18AQ9NYP9 233 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 PRR13Q9NZ81 148 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 CASP8AP2Q9UKL3 1982 aa4.27□□□□□ -1.73
SLIRP-202ENST00000553981 UBN2Q6ZU65 1347 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 WDR33Q9C0J8 1336 aaKnown RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 FFAR3O14843 346 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 GSNP06396 782 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 HMGB2P26583 209 aaKnown RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 MCM4P33991 863 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 EPHX2P34913 555 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 LIMS1P48059 325 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 MAPKAPK2P49137 400 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 CTCFP49711 727 aaPredicted RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF165P49910 485 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 ZNF200P98182 395 aaPredicted RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 CAP1Q01518 475 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 APOBRQ0VD83 1088 aa4.26□□□□□ -1.73
SLIRP-202ENST00000553981 CNGB1Q14028 1251 aaPredicted RBP4.26□□□□□ -1.73
SLIRP-202ENST00000553981 NR1I3Q14994 352 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms