RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 CTIFO43310 598 aaKnown RBP17■□□□□ 0.31
ABCD4-218ENST00000553486 KIF20AO95235 890 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 EN2P19622 333 aaPredicted RBP17■□□□□ 0.31
ABCD4-218ENST00000553486 FECHP22830 423 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
ABCD4-218ENST00000553486 TMTC1Q8IUR5 882 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
ABCD4-218ENST00000553486 POLR3CQ9BUI4 534 aaPredicted RBP17■□□□□ 0.31
ABCD4-218ENST00000553486 TMEM106CQ9BVX2 250 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 FBXO28Q9NVF7 368 aa17■□□□□ 0.31
ABCD4-218ENST00000553486 RBBP6Q7Z6E9 1792 aaKnown RBP16.99■□□□□ 0.31
ABCD4-218ENST00000553486 IGLV3-22A0A075B6J6 115 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 ICAM1P05362 532 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
ABCD4-218ENST00000553486 CYP11B2P19099 503 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 SYT10Q6XYQ8 523 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 TOGARAM2Q6ZUX3 1019 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 SLF1Q9BQI6 1058 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
ABCD4-218ENST00000553486 NUP58Q9BVL2 599 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 CPA4Q9UI42 421 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
ABCD4-218ENST00000553486 CCDC175P0C221 793 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 SPATA31C1P0DKV0 1188 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 TBC1D8BQ0IIM8 1120 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 POTEGQ6S5H5 508 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 SYT2Q8N9I0 419 aaPredicted RBP16.98■□□□□ 0.31
ABCD4-218ENST00000553486 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 SOWAHDA6NJG2 315 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 B4DLN1 442 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 CXCL11O14625 94 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 KRT9P35527 623 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
ABCD4-218ENST00000553486 HERC4Q5GLZ8 1057 aaPredicted RBP16.98■□□□□ 0.31
ABCD4-218ENST00000553486 FKBP15Q5T1M5 1219 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 MCF2L2Q86YR7 1114 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 ZHX2Q9Y6X8 837 aa16.98■□□□□ 0.31
ABCD4-218ENST00000553486 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 PTPRAP18433 802 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 USP14P54578 494 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 PRMT2P55345 433 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 SETQ01105 290 aaPredicted RBP16.97■□□□□ 0.31
ABCD4-218ENST00000553486 SYCP1Q15431 976 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 CEP55Q53EZ4 464 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 TRIM65Q6PJ69 517 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 SH3TC2Q8TF17 1288 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 IQCDQ96DY2 449 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 EIF2AK1Q9BQI3 630 aaKnown RBP16.97■□□□□ 0.31
ABCD4-218ENST00000553486 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 PNMA2Q9UL42 364 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 CAPN11Q9UMQ6 739 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 LUC7L2Q9Y383 392 aaKnown RBP16.97■□□□□ 0.31
ABCD4-218ENST00000553486 DOCK1Q14185 1865 aa16.97■□□□□ 0.31
ABCD4-218ENST00000553486 CTGFP29279 349 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 PSMC4P43686 418 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 HSD17B4P51659 736 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 LRRC41Q15345 812 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 GPAT2Q6NUI2 795 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 RAD9BQ6WBX8 426 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 OR8K1Q8NGG5 319 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 SLC5A5Q92911 643 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 PARK7Q99497 189 aaKnown RBP16.96■□□□□ 0.31
ABCD4-218ENST00000553486 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
ABCD4-218ENST00000553486 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 A0A0G2JLL6 359 aaPredicted RBP16.96■□□□□ 0.3
ABCD4-218ENST00000553486 TTC26A0AVF1 554 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 PSMD10O75832 226 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 PPP2R5CQ13362 524 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 MTF1Q14872 753 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 ARSHQ5FYA8 562 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 MIIPQ5JXC2 388 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 PRRT2Q7Z6L0 340 aaPredicted RBP16.96■□□□□ 0.3
ABCD4-218ENST00000553486 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 EEF2KMTQ96G04 330 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 ERGIC2Q96RQ1 377 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 DNAI1Q9UI46 699 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 CTDP1Q9Y5B0 961 aaPredicted RBP16.96■□□□□ 0.3
ABCD4-218ENST00000553486 PCDHA2Q9Y5H9 948 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 ADGRG1Q9Y653 693 aa16.96■□□□□ 0.3
ABCD4-218ENST00000553486 ZNF536O15090 1300 aa16.95■□□□□ 0.3
ABCD4-218ENST00000553486 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
ABCD4-218ENST00000553486 MEIS1O00470 390 aa16.95■□□□□ 0.3
ABCD4-218ENST00000553486 GAS7O60861 476 aa16.95■□□□□ 0.3
ABCD4-218ENST00000553486 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-218ENST00000553486 EYA4O95677 639 aa16.95■□□□□ 0.3
ABCD4-218ENST00000553486 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-218ENST00000553486 FDX1P10109 184 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms