RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MAFGO15525 162 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 ZBTB43O43298 467 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 CSPG5O95196 566 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 IL9P15248 144 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 EXOSC10Q01780 885 aaKnown RBP13.12□□□□□ -0.31
NEK3-204ENST00000552973 PTPROQ16827 1216 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 TCEAL5Q5H9L2 206 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 FBXO47Q5MNV8 452 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 DHX32Q7L7V1 743 aaKnown RBP13.12□□□□□ -0.31
NEK3-204ENST00000552973 FIBCD1Q8N539 461 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.12□□□□□ -0.31
NEK3-204ENST00000552973 SAMD11Q96NU1 681 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 AZI2Q9H6S1 392 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
NEK3-204ENST00000552973 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
NEK3-204ENST00000552973 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
NEK3-204ENST00000552973 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 H3BQ06 376 aaPredicted RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 STXBP3O00186 592 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 CPA1P15085 419 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 CDC27P30260 824 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 CD52P31358 61 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 ZNF76P36508 570 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 ADCY7P51828 1080 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 ACTR2P61160 394 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 FUT2Q10981 343 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 C1QTNF1Q9BXJ1 281 aa13.11□□□□□ -0.31
NEK3-204ENST00000552973 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
NEK3-204ENST00000552973 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 CTNNB1P35222 781 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 STAT5BP51692 787 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 LEXMQ3ZCV2 418 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
NEK3-204ENST00000552973 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
NEK3-204ENST00000552973 AGO4Q9HCK5 861 aaKnown RBP13.1□□□□□ -0.31
NEK3-204ENST00000552973 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
NEK3-204ENST00000552973 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 GRM6O15303 877 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 PPFIA3O75145 1194 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 FOSP01100 380 aaPredicted RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 FGD1P98174 961 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 TIGD5Q53EQ6 642 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 IER5Q5VY09 327 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 TSHZ1Q6ZSZ6 1077 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 TTC28Q96AY4 2481 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
NEK3-204ENST00000552973 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 TRPV2Q9Y5S1 764 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 NFASCO94856 1347 aa13.09□□□□□ -0.31
NEK3-204ENST00000552973 POTEB3A0JP26 581 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 M0QZ92 97 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 MEIS1O00470 390 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 CCNE2O96020 404 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
NEK3-204ENST00000552973 BMPR1AP36894 532 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 PPP1R18Q6NYC8 613 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 POTEBQ6S5H4 581 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
NEK3-204ENST00000552973 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
NEK3-204ENST00000552973 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 GJD3Q8N144 294 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 NEK9Q8TD19 979 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 CLDND1Q9NY35 253 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 GINS2Q9Y248 185 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 ADGRA3Q8IWK6 1321 aa13.08□□□□□ -0.32
NEK3-204ENST00000552973 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 BACH1O14867 736 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 CDC45O75419 566 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 DGKIO75912 1065 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 ATG7O95352 703 aa13.07□□□□□ -0.32
NEK3-204ENST00000552973 RB1P06400 928 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms