RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 LRRC14Q15048 493 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 MEI1Q5TIA1 1274 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 CHMP6Q96FZ7 201 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 GCKP35557 465 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 KCNK18Q7Z418 384 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 GPR101Q96P66 508 aaPredicted RBP12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 PLCB1Q9NQ66 1216 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 ARFGEF2Q9Y6D5 1785 aa12.63□□□□□ -0.39
PPFIA2-227ENST00000552948 SLC37A4O43826 429 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 TBCAO75347 108 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 SLC16A2P36021 539 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 ZNF76P36508 570 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 TLR2O60603 784 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 LDHCP07864 332 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 FNTAP49354 379 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 CYP4A11Q02928 519 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 BLOC1S4Q9NUP1 217 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 NID2Q14112 1375 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 GSTTP1A0A1W2PQM5 241 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 DNM1LO00429 736 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 PJA2O43164 708 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 GCNT3O95395 438 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 AZI2Q9H6S1 392 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 POTECB2RU33 542 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 GNA14O95837 355 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 CHN1P15882 459 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 TNFAIP3P21580 790 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 HNRNPH3P31942 346 aaKnown RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 STAT1P42224 750 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 C12orf60Q5U649 245 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 GJB7Q6PEY0 223 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 GLG1Q92896 1179 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 INPP4AQ96PE3 977 aaPredicted RBP12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 OSBPL7Q9BZF2 842 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 CTTNBP2NLQ9P2B4 639 aa12.62□□□□□ -0.39
PPFIA2-227ENST00000552948 CAND2O75155 1236 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 TRIM37O94972 964 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 ANKRD20A8PQ5CZ79 823 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 CLEC10AQ8IUN9 316 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 CCDC105Q8IYK2 499 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 SYCE1Q8N0S2 351 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 MMTAG2Q9BU76 263 aaKnown RBP12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 USP11P51784 963 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 DR1Q01658 176 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 XPO6Q96QU8 1125 aaKnown RBP12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 NEUROG2Q9H2A3 272 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 CNOT8Q9UFF9 292 aaKnown RBP12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 CCDC169A6NNP5 214 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 TRAPPC3O43617 180 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 HSPA2P54652 639 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
PPFIA2-227ENST00000552948 CCDC188H7C350 402 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 LRRN2O75325 713 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 PAX7P23759 505 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 CDC25CP30307 473 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 VPS41P49754 854 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 ZNF571Q7Z3V5 609 aaPredicted RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 GCNT4Q9P109 453 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 BCS1LQ9Y276 419 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 L3MBTL1Q9Y468 752 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 FLT1P17948 1338 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 STAT3P40763 770 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 PSMD2Q13200 908 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 TRIM68Q6AZZ1 485 aa12.6□□□□□ -0.39
PPFIA2-227ENST00000552948 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms