RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 APOBRQ0VD83 1088 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 SKIV2LQ15477 1246 aaKnown RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 FAM160B1Q5W0V3 765 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 REXO1Q8N1G1 1221 aaKnown RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 MICALL1Q8N3F8 863 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 YME1L1Q96TA2 773 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 IFIH1Q9BYX4 1025 aaKnown RBP12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
VTI1BP3-201ENST00000550220 TTC28Q96AY4 2481 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 CHRNA1P02708 482 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 ARP10275 920 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 INSRRP14616 1297 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 MARK3P27448 753 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 GRB10Q13322 594 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 PTPROQ16827 1216 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 TCTN1Q2MV58 587 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 TELO2Q9Y4R8 837 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 NID2Q14112 1375 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
VTI1BP3-201ENST00000550220 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 RFXAPO00287 272 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 BACH1O14867 736 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 HBP1O60381 514 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 IFNAR1P17181 557 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 MARCH8Q5T0T0 291 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 CRYGNQ8WXF5 182 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 PCYT2Q99447 389 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 TM6SF1Q9BZW5 370 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 SUGCTQ9HAC7 445 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 UNC80Q8N2C7 3258 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
VTI1BP3-201ENST00000550220 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 IGKV6D-21A0A0A0MT36 114 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 IPO5O00410 1097 aaKnown RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 LPXNO60711 386 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ARHGEF15O94989 841 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 CPA1P15085 419 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 PDIA3P30101 505 aaKnown RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 CIITAP33076 1130 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 USP11P51784 963 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 IGBP1P78318 339 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 PKN1Q16512 942 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ERICH6BQ5W0A0 696 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ZNF746Q6NUN9 644 aaPredicted RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ABHD15Q6UXT9 468 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 TSHZ1Q6ZSZ6 1077 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 SMAP1Q8IYB5 467 aaPredicted RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 HLA-CQ95604 372 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 PGBD1Q96JS3 809 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
VTI1BP3-201ENST00000550220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
VTI1BP3-201ENST00000550220 FAM86B1E9PN63 330 aa12.35□□□□□ -0.43
VTI1BP3-201ENST00000550220 ENPP3O14638 875 aa12.35□□□□□ -0.43
VTI1BP3-201ENST00000550220 CPLX1O14810 134 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms