RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZNF302Q9NR11 478 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 LRWD1Q9UFC0 647 aa23.7■■□□□ 1.38
CACNB3-210ENST00000548874 MAFBQ9Y5Q3 323 aaPredicted RBP23.7■■□□□ 1.38
CACNB3-210ENST00000548874 SCN10AQ9Y5Y9 1956 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 TCHHQ07283 1943 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 A0A1W2PQ45 241 aaPredicted RBP23.69■■□□□ 1.38
CACNB3-210ENST00000548874 A0A1W2PQY0 241 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 HAS3O00219 553 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 BACH1O14867 736 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 COL6A1P12109 1028 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 LONP1P36776 959 aaKnown RBP23.69■■□□□ 1.38
CACNB3-210ENST00000548874 STAT5BP51692 787 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 FAM160B1Q5W0V3 765 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 NEK9Q8TD19 979 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 SPATA32Q96LK8 384 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 AK8Q96MA6 479 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 EIF2AK1Q9BQI3 630 aaKnown RBP23.69■■□□□ 1.38
CACNB3-210ENST00000548874 AZI2Q9H6S1 392 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 GABBR1Q9UBS5 961 aa23.69■■□□□ 1.38
CACNB3-210ENST00000548874 PP2D1A8MPX8 630 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 H3BRB1 525 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 P4HBP07237 508 aaKnown RBP23.68■■□□□ 1.38
CACNB3-210ENST00000548874 UGCGQ16739 394 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 UBE2Q1Q7Z7E8 422 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 DIS3LQ8TF46 1054 aaKnown RBP23.68■■□□□ 1.38
CACNB3-210ENST00000548874 GLG1Q92896 1179 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 CLIC6Q96NY7 704 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 CSRNP2Q9H175 543 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 TUT1Q9H6E5 874 aaKnown RBP23.68■■□□□ 1.38
CACNB3-210ENST00000548874 ERAP1Q9NZ08 941 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 ZNF215Q9UL58 517 aaPredicted RBP23.68■■□□□ 1.38
CACNB3-210ENST00000548874 STK24Q9Y6E0 443 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 WDR81Q562E7 1941 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 BRCA2P51587 3418 aa23.68■■□□□ 1.38
CACNB3-210ENST00000548874 ZNF862O60290 1169 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 SLITRK3O94933 977 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 PSEN2P49810 448 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 SLC26A2P50443 739 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 AXDND1Q5T1B0 1012 aaPredicted RBP23.67■■□□□ 1.38
CACNB3-210ENST00000548874 PDXDC2PQ6P474 469 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 BANK1Q8NDB2 785 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 ERMNQ8TAM6 284 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 ATP6V0A1Q93050 837 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 DYDC2Q96IM9 177 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 GLT1D1Q96MS3 346 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 MMTAG2Q9BU76 263 aaKnown RBP23.67■■□□□ 1.38
CACNB3-210ENST00000548874 POLR3CQ9BUI4 534 aaPredicted RBP23.67■■□□□ 1.38
CACNB3-210ENST00000548874 KATNAL1Q9BW62 490 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 RGL1Q9NZL6 768 aa23.67■■□□□ 1.38
CACNB3-210ENST00000548874 CUTAO60888 179 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 SPATA31C1P0DKV0 1188 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 ATP4AP20648 1035 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 RPA1P27694 616 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 QARSP47897 775 aaKnown RBP23.66■■□□□ 1.38
CACNB3-210ENST00000548874 PSMC5P62195 406 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 MFSD10Q14728 455 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 HAUS3Q68CZ6 603 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 ZNF579Q8NAF0 562 aaKnown RBP23.66■■□□□ 1.38
CACNB3-210ENST00000548874 LXNQ9BS40 222 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 TUFT1Q9NNX1 390 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 WRAP73Q9P2S5 460 aaPredicted RBP23.66■■□□□ 1.38
CACNB3-210ENST00000548874 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
CACNB3-210ENST00000548874 GRIN2DO15399 1336 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 CCDC85CA6NKD9 419 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 MED24O75448 989 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 LYPLA2O95372 231 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 CDC25AP30304 524 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 ME1P48163 572 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 PSMC6P62333 389 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 CYP4A11Q02928 519 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 PLCB4Q15147 1175 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 KIAA0753Q2KHM9 967 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 CLEC17AQ6ZS10 378 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 CATSPER3Q86XQ3 398 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 PAWRQ96IZ0 340 aaKnown RBP23.65■■□□□ 1.38
CACNB3-210ENST00000548874 RNPEPQ9H4A4 650 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 GDPD2Q9HCC8 539 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 STARD7Q9NQZ5 370 aa23.65■■□□□ 1.38
CACNB3-210ENST00000548874 STBD1O95210 358 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 MUTP22033 750 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 SOX10P56693 466 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 CTTNQ14247 550 aaKnown RBP23.64■■□□□ 1.37
CACNB3-210ENST00000548874 KRT79Q5XKE5 535 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 C4orf19Q8IY42 314 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 SLC43A3Q8NBI5 491 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 SNX29Q8TEQ0 813 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 ATP8B4Q8TF62 1192 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 C11orf49Q9H6J7 331 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 ZSWIM4Q9H7M6 989 aa23.64■■□□□ 1.37
CACNB3-210ENST00000548874 SLC26A4O43511 780 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 DKC1O60832 514 aaKnown RBP eCLIP23.63■■□□□ 1.37
CACNB3-210ENST00000548874 MARK3P27448 753 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 CCT6AP40227 531 aaKnown RBP23.63■■□□□ 1.37
CACNB3-210ENST00000548874 PRKCEQ02156 737 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 NBPF20Q3BBV1 942 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 HYIQ5T013 277 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 USP49Q70CQ1 688 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 NECAB2Q7Z6G3 386 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 TPH2Q8IWU9 490 aa23.63■■□□□ 1.37
CACNB3-210ENST00000548874 CCSER1Q9C0I3 900 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms