RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 TBC1D22BQ9NU19 505 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 TMEM260Q9NX78 707 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 TUBE1Q9UJT0 475 aa12.96□□□□□ -0.33
BEST3-209ENST00000548658 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 MBLAC1A4D2B0 266 aaPredicted RBP12.95□□□□□ -0.34
BEST3-209ENST00000548658 IPO5O00410 1097 aaKnown RBP12.95□□□□□ -0.34
BEST3-209ENST00000548658 DLL1O00548 723 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 ATG7O95352 703 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 GJB5O95377 273 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 AMHP03971 560 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 MYOGP15173 224 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 MARK3P27448 753 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 ANAPC15P60006 121 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
BEST3-209ENST00000548658 MBTPS1Q14703 1052 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 GRIK4Q16099 956 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 RAD9AQ99638 391 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 TCEAL9Q9UHQ7 104 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 TELO2Q9Y4R8 837 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
BEST3-209ENST00000548658 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 CDKL5O76039 1030 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 DEXIO95424 95 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 FAM86B2P0C5J1 330 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 INSRRP14616 1297 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 IGFBP4P22692 258 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 CIITAP33076 1130 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 USP11P51784 963 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 NLRP5P59047 1200 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 ITGB3BPQ13352 177 aaPredicted RBP12.94□□□□□ -0.34
BEST3-209ENST00000548658 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 FAM160B1Q5W0V3 765 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 MIS18BP1Q6P0N0 1132 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 FAM43BQ6ZT52 329 aaPredicted RBP12.94□□□□□ -0.34
BEST3-209ENST00000548658 ZNF577Q9BSK1 485 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
BEST3-209ENST00000548658 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
BEST3-209ENST00000548658 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
BEST3-209ENST00000548658 GBF1Q92538 1859 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 BACH1O14867 736 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
BEST3-209ENST00000548658 CTSHP09668 335 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 POU3F3P20264 500 aaPredicted RBP12.93□□□□□ -0.34
BEST3-209ENST00000548658 TAP1Q03518 808 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 IER5Q5VY09 327 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 SMAP1Q8IYB5 467 aaPredicted RBP12.93□□□□□ -0.34
BEST3-209ENST00000548658 NME8Q8N427 588 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 USP38Q8NB14 1042 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 PCYT2Q99447 389 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
BEST3-209ENST00000548658 VPS54Q9P1Q0 977 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
BEST3-209ENST00000548658 A0A0C4DFX4 3053 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 M0QZ92 97 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
BEST3-209ENST00000548658 HBP1O60381 514 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 XBP1P17861 261 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 IGBP1P78318 339 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 DEFB103AP81534 67 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 KRT76Q01546 638 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 PRR16Q569H4 304 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
BEST3-209ENST00000548658 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 MYOCDQ8IZQ8 938 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 DNAJB3Q8WWF6 145 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 IFIH1Q9BYX4 1025 aaKnown RBP12.92□□□□□ -0.34
BEST3-209ENST00000548658 SLKQ9H2G2 1235 aaPredicted RBP12.92□□□□□ -0.34
BEST3-209ENST00000548658 PCDHA4Q9UN74 947 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 PCDHA2Q9Y5H9 948 aa12.92□□□□□ -0.34
BEST3-209ENST00000548658 DDX39AO00148 427 aaKnown RBP12.91□□□□□ -0.34
BEST3-209ENST00000548658 CCNE2O96020 404 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 CHRNA1P02708 482 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 PSAPP07602 524 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 POTEHQ6S545 545 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
BEST3-209ENST00000548658 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 ARNTL2Q8WYA1 636 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 SYMPKQ92797 1274 aaKnown RBP12.91□□□□□ -0.34
BEST3-209ENST00000548658 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 RIT2Q99578 217 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 ZNF302Q9NR11 478 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 PCDHA10Q9Y5I2 948 aa12.91□□□□□ -0.34
BEST3-209ENST00000548658 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
BEST3-209ENST00000548658 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms