RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PIN1Q13526 163 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-222ENST00000545308 NR1I3Q14994 352 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-222ENST00000545308 TMEM177Q53S58 311 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 EEF1DP3Q658K8 133 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 CYB5RLQ6IPT4 315 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 OVCH1Q7RTY7 1134 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 FRMD5Q7Z6J6 570 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 C14orf80Q86SX3 495 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 CBARPQ8N350 705 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-222ENST00000545308 CHTF18Q8WVB6 975 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 MMP19Q99542 508 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 CDH19Q9H159 772 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 ADAM7Q9H2U9 754 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 VTA1Q9NP79 307 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 EMC7Q9NPA0 242 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 AASDHPPTQ9NRN7 309 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 FBXL7Q9UJT9 491 aa5.44□□□□□ -1.54
SNHG1-222ENST00000545308 PEG3Q9GZU2 1588 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 WNT9AO14904 365 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 FGF10O15520 208 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-222ENST00000545308 PEX14O75381 377 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 SOD2P04179 222 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 ADRB1P08588 477 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 GNALP38405 381 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 LSSP48449 732 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 MVKQ03426 396 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CREB3L3Q68CJ9 461 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 ZC3H14Q6PJT7 736 aaKnown RBP5.43□□□□□ -1.54
SNHG1-222ENST00000545308 GGNQ86UU5 652 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CERS3Q8IU89 383 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CHPFQ8IZ52 775 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CHST14Q8NCH0 376 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CHMP4CQ96CF2 233 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 ALG1Q9BT22 464 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 CDIP1Q9H305 208 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 IPPKQ9H8X2 491 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 SPTLC3Q9NUV7 552 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 THG1LQ9NWX6 298 aaKnown RBP5.43□□□□□ -1.54
SNHG1-222ENST00000545308 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 RIMBP3CA6NJZ7 1639 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 RIMBP3BA6NNM3 1639 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 RIMBP3Q9UFD9 1639 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 WDR62O43379 1518 aa5.43□□□□□ -1.54
SNHG1-222ENST00000545308 NPHP3-ACAD11A0A0J9YXS1 232 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 CCDC66A2RUB6 948 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 K7ESF4 209 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 FFAR3O14843 346 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 PRPF3O43395 683 aaKnown RBP5.42□□□□□ -1.54
SNHG1-222ENST00000545308 GAS7O60861 476 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 FBXO21O94952 628 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 APPP05067 770 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 MSL3P1P0C860 447 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 PFKLP17858 780 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 PAMP19021 973 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 DNM2P50570 870 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 ERVK-21P61565 698 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 ZNF200P98182 395 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-222ENST00000545308 SART3Q15020 963 aaKnown RBP5.42□□□□□ -1.54
SNHG1-222ENST00000545308 KIZQ2M2Z5 673 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 ATP13A4Q4VNC1 1196 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 HLA-DQA1Q5Y7H0 255 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 IQCEQ6IPM2 695 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 CPNE8Q86YQ8 564 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 PASD1Q8IV76 773 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 PTCHD1Q96NR3 888 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 CABP5Q9NP86 173 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 H2AFY2Q9P0M6 372 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-222ENST00000545308 CBLCQ9ULV8 474 aa5.42□□□□□ -1.54
SNHG1-222ENST00000545308 A0A1W2PQ27 194 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 A0A1W2PQ64 194 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 A0A1W2PQC6 194 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 A0A1W2PQD8 194 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 KIF3BO15066 747 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 ABLIM3O94929 683 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 LIMS1P48059 325 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 KCNC1P48547 511 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 SLURP1P55000 103 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 TARBP2Q15633 366 aaKnown RBP5.41□□□□□ -1.54
SNHG1-222ENST00000545308 MAP9Q49MG5 647 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 C16orf59Q7L2K0 433 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 MYO1HQ8N1T3 1032 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 CISD2Q8N5K1 135 aaKnown RBP5.41□□□□□ -1.54
SNHG1-222ENST00000545308 FBXW5Q969U6 566 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 BORCS6Q96GS4 357 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 CCDC136Q96JN2 1154 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 MENTQ9BUN1 341 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 RHOBTB2Q9BYZ6 727 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
SNHG1-222ENST00000545308 ZKSCAN5Q9Y2L8 839 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 RIPOR2Q9Y4F9 1068 aa5.41□□□□□ -1.54
SNHG1-222ENST00000545308 CEP164Q9UPV0 1460 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 E2F8A0AVK6 867 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 C7orf72A4D263 438 aa5.4□□□□□ -1.54
SNHG1-222ENST00000545308 FAM47E-STBD1D6RA91 191 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms