RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 TBC1D8O95759 1140 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 NBPF9Q3BBW0 867 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 IFIH1Q9BYX4 1025 aaKnown RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 BHMT2Q9H2M3 363 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 CEP72Q9P209 647 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 FAM184BQ9ULE4 1060 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 PCDHA13Q9Y5I0 950 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 SAR1BQ9Y6B6 198 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 CETN3O15182 167 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 EYA4O95677 639 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 TBC1D10BQ4KMP7 808 aaPredicted RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 EPM2AIP1Q7L775 607 aaPredicted RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 SECISBP2LQ93073 1101 aaKnown RBP15.35■□□□□ 0.05
MSH2-206ENST00000543555 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 RAB21Q9UL25 225 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 TRAF3IP3Q9Y228 551 aa15.35■□□□□ 0.05
MSH2-206ENST00000543555 BRCA1P38398 1863 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 AKR1B10O60218 316 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 PLA2G6O60733 806 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 DDNO94850 711 aaPredicted RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 NR2F2P24468 414 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 KNOP1Q1ED39 458 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 SASH3O75995 380 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 NOL4O94818 638 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 CAP2P40123 477 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 PNKPQ96T60 521 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 RUSC1Q9BVN2 902 aa15.34■□□□□ 0.05
MSH2-206ENST00000543555 LSM14BQ9BX40 385 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 NUCKS1Q9H1E3 243 aaKnown RBP15.34■□□□□ 0.05
MSH2-206ENST00000543555 PSMD10O75832 226 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 HOXD13P35453 343 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 GMPSP49915 693 aaPredicted RBP15.33■□□□□ 0.05
MSH2-206ENST00000543555 DMTNQ08495 405 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.05
MSH2-206ENST00000543555 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.05
MSH2-206ENST00000543555 AGBL3Q8NEM8 1001 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 HSD17B14Q9BPX1 270 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 NLRC4Q9NPP4 1024 aa15.33■□□□□ 0.05
MSH2-206ENST00000543555 SSU72P8A0A1W2PR75 194 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 RSPH10B2B2RC85 870 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 RSPH10BP0C881 870 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.04
MSH2-206ENST00000543555 SYN2Q92777 582 aaPredicted RBP15.33■□□□□ 0.04
MSH2-206ENST00000543555 SLC5A5Q92911 643 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 VPS33BQ9H267 617 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 TUFT1Q9NNX1 390 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 SMCHD1A6NHR9 2005 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 TBCAO75347 108 aaKnown RBP15.33■□□□□ 0.04
MSH2-206ENST00000543555 MYBP10242 640 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 GPIHBP1Q8IV16 184 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.04
MSH2-206ENST00000543555 GLIS2Q9BZE0 524 aaPredicted RBP15.33■□□□□ 0.04
MSH2-206ENST00000543555 ST7Q9NRC1 585 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
MSH2-206ENST00000543555 PDXKO00764 312 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 SRGAP2O75044 1071 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 PRPF6O94906 941 aaKnown RBP15.32■□□□□ 0.04
MSH2-206ENST00000543555 RHOXF2BP0C7M4 288 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 UBXN2AP68543 259 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 CTTNQ14247 550 aaKnown RBP15.32■□□□□ 0.04
MSH2-206ENST00000543555 LONRF2Q1L5Z9 754 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 SLC30A10Q6XR72 485 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 TRIM58Q8NG06 486 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 RHOXF2Q9BQY4 288 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 PGAP2Q9UHJ9 254 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 CALUO43852 315 aaPredicted RBP15.32■□□□□ 0.04
MSH2-206ENST00000543555 SLITRK3O94933 977 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
MSH2-206ENST00000543555 KCNH2Q12809 1159 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 CEP55Q53EZ4 464 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 FRMD5Q7Z6J6 570 aa15.32■□□□□ 0.04
MSH2-206ENST00000543555 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms