RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PFKPQ01813 784 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 SKIDA1Q1XH10 827 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 TBC1D10BQ4KMP7 808 aaPredicted RBP5.49□□□□□ -1.53
LEMD3-204ENST00000542032 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 SCLYQ96I15 445 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
LEMD3-204ENST00000542032 MRPL4Q9BYD3 311 aaKnown RBP5.49□□□□□ -1.53
LEMD3-204ENST00000542032 TMEM168Q9H0V1 697 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 L2HGDHQ9H9P8 463 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 SMURF1Q9HCE7 757 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 CDK11AQ9UQ88 783 aaPredicted RBP5.49□□□□□ -1.53
LEMD3-204ENST00000542032 INVSQ9Y283 1065 aa5.49□□□□□ -1.53
LEMD3-204ENST00000542032 IGSF3O75054 1194 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 CLASP2O75122 1294 aaKnown RBP5.48□□□□□ -1.53
LEMD3-204ENST00000542032 IL18BPO95998 194 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 KCNA6P17658 529 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 TGM1P22735 817 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 JAM2P57087 298 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 DBPQ10586 325 aaPredicted RBP5.48□□□□□ -1.53
LEMD3-204ENST00000542032 SMAD2Q15796 467 aaKnown RBP5.48□□□□□ -1.53
LEMD3-204ENST00000542032 CRB2Q5IJ48 1285 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 BORAQ6PGQ7 559 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 FAM124AQ86V42 546 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 OSTM1Q86WC4 334 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 KLHL36Q8N4N3 616 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 PTCH2Q9Y6C5 1203 aa5.48□□□□□ -1.53
LEMD3-204ENST00000542032 CCDC66A2RUB6 948 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 GSTA4O15217 222 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 GJA4P35212 333 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 NFATC3Q12968 1075 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 CRY1Q16526 586 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 FAM47CQ5HY64 1035 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 BTBD8Q5XKL5 378 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 TRMT10BQ6PF06 316 aaKnown RBP5.47□□□□□ -1.53
LEMD3-204ENST00000542032 PTRH1Q86Y79 214 aaKnown RBP5.47□□□□□ -1.53
LEMD3-204ENST00000542032 NUDT10Q8NFP7 164 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 IGDCC4Q8TDY8 1250 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 NUDT11Q96G61 164 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 CELF4Q9BZC1 486 aaKnown RBP5.47□□□□□ -1.53
LEMD3-204ENST00000542032 SCAND2PQ9GZW5 306 aaPredicted RBP5.47□□□□□ -1.53
LEMD3-204ENST00000542032 TRIM39Q9HCM9 518 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 CATSPERZQ9NTU4 200 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 ARHGAP20Q9P2F6 1191 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 FTSJ1Q9UET6 329 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 NDOR1Q9UHB4 597 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 ATP23Q9Y6H3 246 aa5.47□□□□□ -1.53
LEMD3-204ENST00000542032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.46□□□□□ -1.54
LEMD3-204ENST00000542032 MATN3O15232 486 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 RASGRP1O95267 797 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
LEMD3-204ENST00000542032 CYP1A1P04798 512 aaPredicted RBP5.46□□□□□ -1.54
LEMD3-204ENST00000542032 SRGAP2CP0DJJ0 459 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 HERVK_113P62684 666 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 ST5P78524 1137 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 SURF1Q15526 300 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 PHF19Q5T6S3 580 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 NOSTRINQ8IVI9 506 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 AJUBAQ96IF1 538 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 MRIQ9BWK5 157 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 KATNBL1Q9H079 304 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 SLITRK6Q9H5Y7 841 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 NCOA5Q9HCD5 579 aaKnown RBP5.46□□□□□ -1.54
LEMD3-204ENST00000542032 BTBD7Q9P203 1132 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 SFMBT1Q9UHJ3 866 aa5.46□□□□□ -1.54
LEMD3-204ENST00000542032 TCRBV16S1A1N1A0A5B0 115 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 K7ESM1 405 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 AOAHP28039 575 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 EPHB4P54760 987 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 SEC23AQ15436 765 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 NFE2L2Q16236 605 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 ABHD17CQ6PCB6 329 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 Q6ZUG5 572 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 OVCH1Q7RTY7 1134 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 BRAPQ7Z569 592 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 FGD2Q7Z6J4 655 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 PLEKHH3Q7Z736 793 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
LEMD3-204ENST00000542032 TTC9BQ8N6N2 239 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 STPG3Q8N7X2 389 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 MAGEB10Q96LZ2 347 aaPredicted RBP5.45□□□□□ -1.54
LEMD3-204ENST00000542032 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
LEMD3-204ENST00000542032 PLD2O14939 933 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 LAMTOR5O43504 91 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 NPTXRO95502 500 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 MPIG6BO95866 241 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 GLRBP48167 497 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 SQSTM1Q13501 440 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 FSTL4Q6MZW2 842 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 KBTBD2Q8IY47 623 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 DRC1Q96MC2 740 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 SAMD11Q96NU1 681 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 BARX1Q9HBU1 254 aaPredicted RBP5.44□□□□□ -1.54
LEMD3-204ENST00000542032 SLC39A2Q9NP94 309 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 RIC8BQ9NVN3 520 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 PPP4R1LQ9P1A2 415 aa5.44□□□□□ -1.54
LEMD3-204ENST00000542032 FBXO21O94952 628 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 KRT15P19012 456 aa5.43□□□□□ -1.54
LEMD3-204ENST00000542032 CSF2RBP32927 897 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms