RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 AGO3Q9H9G7 860 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 NCDNQ9UBB6 729 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 CDV3Q9UKY7 258 aaKnown RBP11.42□□□□□ -0.58
CHFR-220ENST00000541817 DOCK5Q9H7D0 1870 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 FANCMQ8IYD8 2048 aa11.42□□□□□ -0.58
CHFR-220ENST00000541817 FSCN2O14926 492 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 GPAA1O43292 621 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 CAND2O75155 1236 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 CFHP08603 1231 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 ATP5JP18859 108 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 KCNA4P22459 653 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 CD52P31358 61 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 MGAT3Q09327 533 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 ZSCAN25Q6NSZ9 544 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 CES5AQ6NT32 575 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 THNSL1Q8IYQ7 743 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 ZDHHC14Q8IZN3 488 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 ZBTB10Q96DT7 871 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 DBR1Q9UK59 544 aaKnown RBP11.41□□□□□ -0.58
CHFR-220ENST00000541817 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 OTOGLQ3ZCN5 2332 aa11.41□□□□□ -0.58
CHFR-220ENST00000541817 KRBA1A5PL33 1030 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 POTEMA6NI47 508 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
CHFR-220ENST00000541817 EIF3JO75822 258 aaKnown RBP11.4□□□□□ -0.58
CHFR-220ENST00000541817 NR3C2P08235 984 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 RFX1P22670 979 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 PPARAQ07869 468 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 FBXO47Q5MNV8 452 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
CHFR-220ENST00000541817 UTP14CQ5TAP6 766 aaKnown RBP11.4□□□□□ -0.58
CHFR-220ENST00000541817 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 NPAS4Q8IUM7 802 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 ITPRIPQ8IWB1 547 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 LMBR1Q8WVP7 490 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 IWS1Q96ST2 819 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 SEC62Q99442 399 aaKnown RBP11.4□□□□□ -0.58
CHFR-220ENST00000541817 TCF25Q9BQ70 676 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 UBA5Q9GZZ9 404 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 AAASQ9NRG9 546 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 CA14Q9ULX7 337 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 CDY2AQ9Y6F7 541 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
CHFR-220ENST00000541817 FNDC1Q4ZHG4 1894 aaPredicted RBP11.4□□□□□ -0.59
CHFR-220ENST00000541817 PATL2C9JE40 543 aaKnown RBP11.39□□□□□ -0.59
CHFR-220ENST00000541817 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 HOXB8P17481 243 aaPredicted RBP11.39□□□□□ -0.59
CHFR-220ENST00000541817 ADAM17P78536 824 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 PPM1JQ5JR12 505 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 ZC3H14Q6PJT7 736 aaKnown RBP11.39□□□□□ -0.59
CHFR-220ENST00000541817 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 PXMP2Q9NR77 195 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 HCFC2Q9Y5Z7 792 aa11.39□□□□□ -0.59
CHFR-220ENST00000541817 KAT6AQ92794 2004 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 SCG2P13521 617 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 UBA1P22314 1058 aaKnown RBP11.38□□□□□ -0.59
CHFR-220ENST00000541817 CA8P35219 290 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 PBX3P40426 434 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 MTHFRP42898 656 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 UBE3AQ05086 875 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 TDGQ13569 410 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 FAM102BQ5T8I3 360 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 IL31RAQ8NI17 732 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 APPBP2Q92624 585 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 CASP10Q92851 521 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 NECTIN4Q96NY8 510 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 RTKNQ9BST9 563 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
CHFR-220ENST00000541817 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
CHFR-220ENST00000541817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHFR-220ENST00000541817 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 KINO60870 393 aaKnown RBP11.37□□□□□ -0.59
CHFR-220ENST00000541817 LRRN2O75325 713 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
CHFR-220ENST00000541817 EOMESO95936 686 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 CFBP00751 764 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
CHFR-220ENST00000541817 STAG3L1P0CL83 205 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 PDHBP11177 359 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 GNAT1P11488 350 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 RLBP1P12271 317 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 SP4Q02446 784 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 TSHZ1Q6ZSZ6 1077 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
CHFR-220ENST00000541817 C1orf210Q8IVY1 113 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 RGS22Q8NE09 1264 aa11.37□□□□□ -0.59
CHFR-220ENST00000541817 RASGRP4Q8TDF6 673 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms