RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FRS3O43559 492 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 XPOTO43592 962 aaKnown RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 IGHDP01880 384 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 NAT1P18440 290 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 SMARCA1P28370 1054 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 NTRK3Q16288 839 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 KIAA0753Q2KHM9 967 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 CCDC38Q502W7 563 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 FKBP15Q5T1M5 1219 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 COL13A1Q5TAT6 717 aaPredicted RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 PLBD1Q6P4A8 553 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 ABHD17CQ6PCB6 329 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 LILRA6Q6PI73 481 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 RFX8Q6ZV50 586 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 SYDE1Q6ZW31 735 aaPredicted RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 WAPLQ7Z5K2 1190 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 PCYOX1LQ8NBM8 494 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 LSM14AQ8ND56 463 aaKnown RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 AFAP1L1Q8TED9 768 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 SSH1Q8WYL5 1049 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 ARL8AQ96BM9 186 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 HVCN1Q96D96 273 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 ZMAT2Q96NC0 199 aaKnown RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 BHMT2Q9H2M3 363 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 PLEKHA5Q9HAU0 1116 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 DMRT3Q9NQL9 472 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 NSMCE4AQ9NXX6 385 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 B4GALT6Q9UBX8 382 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 PCDHGB6Q9Y5F9 930 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 CORINQ9Y5Q5 1042 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 MAGED1Q9Y5V3 778 aaPredicted RBP6.38□□□□□ -1.39
DDB1-219ENST00000541513 SNCAIPQ9Y6H5 919 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 USP47Q96K76 1375 aa6.38□□□□□ -1.39
DDB1-219ENST00000541513 TOPAZ1Q8N9V7 1692 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 USP32Q8NFA0 1604 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 TULP4Q9NRJ4 1543 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 MST1RQ04912 1400 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 CHL1O00533 1208 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 SIAH2O43255 324 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 HMMRO75330 724 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 SASH3O75995 380 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 CRTAMO95727 393 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 SOD2P04179 222 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 POU2F2P09086 479 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 DHRS4L1P0CG22 281 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 XPAP23025 273 aaPredicted RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 CTNNA1P35221 906 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 ZNF157P51786 506 aaPredicted RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 CLNS1AP54105 237 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 ADKP55263 362 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 PRR20EP86478 221 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 PRR20CP86479 221 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 PRR20DP86480 221 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 PRR20BP86481 221 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 PRR20AP86496 221 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 SPRYD7Q5W111 196 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 HIBCHQ6NVY1 386 aaPredicted RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 ZNF713Q8N859 430 aaPredicted RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 C7orf31Q8N865 590 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 ANKLE1Q8NAG6 615 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 BVESQ8NE79 360 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 APPL2Q8NEU8 664 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 TRAPPC12Q8WVT3 735 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 SLC5A5Q92911 643 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 CCDC47Q96A33 483 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 ZC3H10Q96K80 434 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 TMEM120AQ9BXJ8 343 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 GTPBP4Q9BZE4 634 aaKnown RBP6.37□□□□□ -1.39
DDB1-219ENST00000541513 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 CBX8Q9HC52 389 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 UBN1Q9NPG3 1134 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 WASH6PQ9NQA3 447 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 TMCC3Q9ULS5 477 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 PADI4Q9UM07 663 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 ZKSCAN5Q9Y2L8 839 aa6.37□□□□□ -1.39
DDB1-219ENST00000541513 KIF1AQ12756 1690 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ANKARQ7Z5J8 1434 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 C19orf81C9J6K1 198 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 H3BRJ5 948 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 PDE2AO00408 941 aaPredicted RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 TRAF5O00463 557 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 AQP7O14520 342 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 PPEF1O14829 653 aaPredicted RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 TBX1O43435 398 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 TOM1O60784 492 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 TRPA1O75762 1119 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 SLITRK5O94991 958 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 BAG2O95816 211 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CSTBP04080 98 aaKnown RBP6.36□□□□□ -1.39
DDB1-219ENST00000541513 APPP05067 770 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 ABCB4P21439 1286 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 KRT9P35527 623 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 KRT20P35900 424 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 CDK8P49336 464 aa6.36□□□□□ -1.39
DDB1-219ENST00000541513 PRIM2P49643 509 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms