RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 RABEP2Q9H5N1 569 aa14.59□□□□□ -0.07
PRICKLE3-205ENST00000540849 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
PRICKLE3-205ENST00000540849 HDAC9Q9UKV0 1011 aa14.59□□□□□ -0.07
PRICKLE3-205ENST00000540849 SUGT1Q9Y2Z0 365 aa14.59□□□□□ -0.07
PRICKLE3-205ENST00000540849 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
PRICKLE3-205ENST00000540849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 RIMBP2O15034 1052 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 CETN3O15182 167 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 GYS1P13807 737 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 ADRA2BP18089 450 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 NR2F2P24468 414 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 SH2D3CQ8N5H7 860 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 IFT81Q8WYA0 676 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 PIK3R5Q8WYR1 880 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 MBOAT7Q96N66 472 aa14.58□□□□□ -0.07
PRICKLE3-205ENST00000540849 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 VGLL3A8MV65 326 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 SLC9A1P19634 815 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 PTK2Q05397 1052 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 ZNF571Q7Z3V5 609 aaPredicted RBP14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 LRRC4BQ9NT99 713 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 SIPA1L1O43166 1804 aa14.58□□□□□ -0.08
PRICKLE3-205ENST00000540849 CYP3A7-CYP3A51PA0A087WV96 503 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 BTNL10A8MVZ5 291 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 RAD51CO43502 376 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 KRT14P02533 472 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 MYBP10242 640 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 CYP3A7P24462 503 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 HOXA10P31260 410 aaPredicted RBP14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 HOXD13P35453 343 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 USP11P51784 963 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 GUCY2FP51841 1108 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 PSMC6P62333 389 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 SPIRE1Q08AE8 756 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 GIT2Q14161 759 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 TRADDQ15628 312 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 IRF2BP2Q7Z5L9 587 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 DNAAF5Q86Y56 855 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 IQCKQ8N0W5 287 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 MREGQ8N565 214 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 USP38Q8NB14 1042 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 MEIS1O00470 390 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 SCNN1DP51172 638 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 PDCLQ13371 301 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 CFAP58Q5T655 872 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 KCTD16Q68DU8 428 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 PACS2Q86VP3 889 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 BCAS4Q8TDM0 211 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 AJAP1Q9UKB5 411 aaPredicted RBP14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
PRICKLE3-205ENST00000540849 HLA-DOAP06340 250 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CDC37Q16543 378 aaPredicted RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 EPM2AIP1Q7L775 607 aaPredicted RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CATSPER3Q86XQ3 398 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 KLHL7Q8IXQ5 586 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 SLFN12Q8IYM2 578 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 REEP2Q9BRK0 252 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 COA1Q9GZY4 146 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 DNAJC18Q9H819 358 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 TRAF3IP3Q9Y228 551 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 MEIS2O14770 477 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 RAD21O60216 631 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CLSTN1O94985 981 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 KIF4AO95239 1232 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 AFPP02771 609 aaKnown RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 UCHL3P15374 230 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 TNNC1P63316 161 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 DDR1Q08345 913 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 NFIAQ12857 509 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 PABPC4Q13310 644 aaKnown RBP eCLIP14.56□□□□□ -0.083e-10■■□□□ 13.8
PRICKLE3-205ENST00000540849 SF3B2Q13435 895 aaKnown RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 C10orf76Q5T2E6 689 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 FRMD5Q7Z6J6 570 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 EFCAB13Q8IY85 973 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 RBM46Q8TBY0 533 aaKnown RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CRYGNQ8WXF5 182 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 TAF4BQ92750 862 aa14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 ARMCX3Q9UH62 379 aaPredicted RBP14.56□□□□□ -0.08
PRICKLE3-205ENST00000540849 CES2O00748 559 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 KCNK3O14649 394 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 SPATA31C1P0DKV0 1188 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 PON1P27169 355 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 ATP1A2P50993 1020 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 ARHGAP4P98171 946 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 RPS6KA1Q15418 735 aa14.55□□□□□ -0.08
PRICKLE3-205ENST00000540849 KNOP1Q1ED39 458 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms