RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 JAKMIP2Q96AA8 810 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 EDEM3Q9BZQ6 932 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 KCTD10Q9H3F6 313 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 DNM3Q9UQ16 869 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 SAMM50Q9Y512 469 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 TRAF5O00463 557 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 KRT86O43790 486 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 IPO7O95373 1038 aaKnown RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 KRT18P05783 430 aaKnown RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 SYT2Q8N9I0 419 aaPredicted RBP12.48□□□□□ -0.41
LGR5-203ENST00000540815 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
LGR5-203ENST00000540815 CCDC151A5D8V7 595 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 EPHB6O15197 1021 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 TBC1D12O60347 775 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CCDC40Q4G0X9 1142 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 HDXQ7Z353 690 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 POLR3CQ9BUI4 534 aaPredicted RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 VPS33BQ9H267 617 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 RANBP17Q9H2T7 1088 aaKnown RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 PSD3Q9NYI0 1048 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 PLA2G6O60733 806 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CCDC172P0C7W6 258 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 DPEP1P16444 411 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 SCP2P22307 547 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 ZNF76P36508 570 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 GIT2Q14161 759 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CYP2W1Q8TAV3 490 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CCDC42Q96M95 316 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 RNF40O75150 1001 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 VAV2P52735 878 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 PSMC6P62333 389 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 EDRF1Q3B7T1 1238 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 TRAPPC11Q7Z392 1133 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 BAP1Q92560 729 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
LGR5-203ENST00000540815 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
LGR5-203ENST00000540815 LCA5LO95447 670 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 MAP2K2P36507 400 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 KCNMA1Q12791 1236 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 TBC1D5Q92609 795 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 ARHGAP20Q9P2F6 1191 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 CEP83Q9Y592 693 aa12.46□□□□□ -0.41
LGR5-203ENST00000540815 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.42
LGR5-203ENST00000540815 RCCD1A6NED2 376 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 MEIS1O00470 390 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 HNRNPH1P31943 449 aaKnown RBP12.46□□□□□ -0.42
LGR5-203ENST00000540815 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.42
LGR5-203ENST00000540815 SPA17Q15506 151 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 PDXDC1Q6P996 788 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 KCNV1Q6PIU1 500 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 FAM83AQ86UY5 434 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 FAM160B2Q86V87 743 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 TRIM59Q8IWR1 403 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.42
LGR5-203ENST00000540815 CTAGE15A4D2H0 777 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 LRRC53A6NM62 1247 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 GCOM1H8Y6P7 765 aaPredicted RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 POLR2MP0CAP2 368 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 ERCC3P19447 782 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 MMS22LQ6ZRQ5 1243 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 RRAGAQ7L523 313 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 EPM2AIP1Q7L775 607 aaPredicted RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
LGR5-203ENST00000540815 EIF2AK1Q9BQI3 630 aaKnown RBP12.45□□□□□ -0.42
LGR5-203ENST00000540815 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms