RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 PRR16Q569H4 304 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 BRDTQ58F21 947 aaPredicted RBP11.94□□□□□ -0.5
ATL3-204ENST00000540699 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 FERMT2Q96AC1 680 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
ATL3-204ENST00000540699 A0A1B0GVL5 298 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
ATL3-204ENST00000540699 MSH4O15457 936 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 PFKFB1P16118 471 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 MCM7P33993 719 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 NDUFA8P51970 172 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 PURAQ00577 322 aaKnown RBP11.93□□□□□ -0.5
ATL3-204ENST00000540699 LETM2Q2VYF4 491 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 ARL6IP4Q66PJ3 421 aaKnown RBP11.93□□□□□ -0.5
ATL3-204ENST00000540699 CCDC73Q6ZRK6 1079 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 RBM43Q6ZSC3 357 aaKnown RBP11.93□□□□□ -0.5
ATL3-204ENST00000540699 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 ETNPPLQ8TBG4 499 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 SPATA33Q96N06 139 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 GPR20Q99678 358 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 MLXIPQ9HAP2 919 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 TBC1D22BQ9NU19 505 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 DDX25Q9UHL0 483 aaKnown RBP11.93□□□□□ -0.5
ATL3-204ENST00000540699 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 EYSQ5T1H1 3165 aa11.93□□□□□ -0.5
ATL3-204ENST00000540699 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 LAD1O00515 517 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 TBX3O15119 743 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 SLC37A4O43826 429 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 F2P00734 622 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 PRPHP41219 470 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 IL17AQ16552 155 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 DGKDQ16760 1214 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 LRIT3Q3SXY7 679 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 B3GNT9Q6UX72 402 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 CXCL17Q6UXB2 119 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 TDHQ8IZJ6 230 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 FAM20AQ96MK3 541 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 RIT2Q99578 217 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 SDF4Q9BRK5 362 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
ATL3-204ENST00000540699 SEZ6LQ9BYH1 1024 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 SENP6Q9GZR1 1112 aaPredicted RBP11.92□□□□□ -0.5
ATL3-204ENST00000540699 CSRNP2Q9H175 543 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 NUP62CLQ9H1M0 184 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 JPH1Q9HDC5 661 aaPredicted RBP11.92□□□□□ -0.5
ATL3-204ENST00000540699 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 TELO2Q9Y4R8 837 aa11.92□□□□□ -0.5
ATL3-204ENST00000540699 GRIN2DO15399 1336 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 GSTTP1A0A1W2PQM5 241 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 SYCE3A1L190 88 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 HAS3O00219 553 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 CCNT1O60563 726 aaKnown RBP11.91□□□□□ -0.5
ATL3-204ENST00000540699 LGR5O75473 907 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 PSMD10O75832 226 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 LETM1O95202 739 aaPredicted RBP11.91□□□□□ -0.5
ATL3-204ENST00000540699 ATG7O95352 703 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 CCNE2O96020 404 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 MYCNP04198 464 aaPredicted RBP11.91□□□□□ -0.5
ATL3-204ENST00000540699 CDK7P50613 346 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 ZNF746Q6NUN9 644 aaPredicted RBP11.91□□□□□ -0.5
ATL3-204ENST00000540699 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 SLC39A5Q6ZMH5 540 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 GAS2L3Q86XJ1 694 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 KAT2BQ92831 832 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 C16orf70Q9BSU1 422 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 FUCA2Q9BTY2 467 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 UBE2OQ9C0C9 1292 aaKnown RBP11.91□□□□□ -0.5
ATL3-204ENST00000540699 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
ATL3-204ENST00000540699 EMSYQ7Z589 1322 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 IGKV6D-21A0A0A0MT36 114 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
ATL3-204ENST00000540699 SORBS3O60504 671 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 NEMFO60524 1076 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 ZNF202O95125 648 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 LGALS2P05162 132 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 MYL3P08590 195 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 OR52Z1P0C646 297 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 ACTR2P61160 394 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 KRT76Q01546 638 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 SPECC1Q5M775 1068 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 LRCH2Q5VUJ6 765 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 USP49Q70CQ1 688 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 HAS1Q92839 578 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 MTMR9Q96QG7 549 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 STARD7Q9NQZ5 370 aa11.9□□□□□ -0.5
ATL3-204ENST00000540699 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms