RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ERGIC2Q96RQ1 377 aa18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 RREB1Q92766 1687 aa18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 TESPA1A2RU30 521 aaPredicted RBP18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 CLK2P49760 499 aaKnown RBP18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 EHHADHQ08426 723 aa18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
EPB41L3-204ENST00000540638 ZNF263O14978 683 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 TBC1D8O95759 1140 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 RSRC2Q7L4I2 434 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 LDHDQ86WU2 507 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 ARP10275 920 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 EXOC3L4Q17RC7 722 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 ARSHQ5FYA8 562 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 ANKZF1Q9H8Y5 726 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 EIF3CLB5ME19 914 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 ABCB4P21439 1286 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 PRPF4BQ13523 1007 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 GOLGA6L1Q8N7Z2 621 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 COG1Q8WTW3 980 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 IFT81Q8WYA0 676 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 MS4A14Q96JA4 679 aa18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 EIF3CQ99613 913 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 LUC7LQ9NQ29 371 aaKnown RBP18.78■□□□□ 0.6
EPB41L3-204ENST00000540638 TRIM49P0CI25 452 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 TRIM49CP0CI26 452 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 DMTNQ08495 405 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 GIT2Q14161 759 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 PROCA1Q8NCQ7 364 aaPredicted RBP18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 TMEM150BA6NC51 233 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 EXOC3O60645 756 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 RASA3Q14644 834 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 DNAJC21Q5F1R6 531 aaKnown RBP18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 RABEP2Q9H5N1 569 aa18.77■□□□□ 0.6
EPB41L3-204ENST00000540638 NHSQ6T4R5 1651 aa18.77■□□□□ 0.59
EPB41L3-204ENST00000540638 N4BP1O75113 896 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 LRRN2O75325 713 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 ENTPD3O75355 529 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 COG2Q14746 738 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 KNOP1Q1ED39 458 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 TATDN1Q6P1N9 297 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 SAMD7Q7Z3H4 446 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 NOX5Q96PH1 765 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 PURBQ96QR8 312 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 KCNMB3Q9NPA1 279 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 DDX60LQ5H9U9 1706 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 CALUO43852 315 aaPredicted RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 RPA1P27694 616 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 TRIM58Q8NG06 486 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 PACSIN1Q9BY11 444 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 MYO1AQ9UBC5 1043 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 MRPL11Q9Y3B7 192 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 CCDC151A5D8V7 595 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 NR3C1P04150 777 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 CKAP4Q07065 602 aaKnown RBP18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 KCNMA1Q12791 1236 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 TERF2Q15554 542 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 PDXDC1Q6P996 788 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 HDXQ7Z353 690 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 MIER3Q7Z3K6 550 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 MKL1Q969V6 931 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 CENPHQ9H3R5 247 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
EPB41L3-204ENST00000540638 GFPT2O94808 682 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 RPL13P26373 211 aaKnown RBP18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 TAF4BQ92750 862 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 IPO5O00410 1097 aaKnown RBP18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 NFIBO00712 420 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 SPATA31C1P0DKV0 1188 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 KLHL7Q8IXQ5 586 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 EHMT1Q9H9B1 1298 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 HYOU1Q9Y4L1 999 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 PLIN4Q96Q06 1357 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 SREBF1P36956 1147 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 TNIP1Q15025 636 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 WDR18Q9BV38 432 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 TSGA10Q9BZW7 698 aa18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 HERC5Q9UII4 1024 aaKnown RBP18.75■□□□□ 0.59
EPB41L3-204ENST00000540638 CCDC169A6NNP5 214 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 AKAP3O75969 853 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 SLC12A3P55017 1021 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 BRD3Q15059 726 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 CEP55Q53EZ4 464 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 ADAT2Q7Z6V5 191 aaKnown RBP18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 ETNPPLQ8TBG4 499 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 U2AF1L4Q8WU68 220 aaKnown RBP18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 FAM20AQ96MK3 541 aa18.74■□□□□ 0.59
EPB41L3-204ENST00000540638 GBP3Q9H0R5 595 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms