RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 MYO6Q9UM54 1294 aa10.28□□□□□ -0.76
UBE3B-207ENST00000537063 GUCA1BQ9UMX6 200 aa10.28□□□□□ -0.76
UBE3B-207ENST00000537063 UBE4BO95155 1302 aa10.28□□□□□ -0.76
UBE3B-207ENST00000537063 WDR46O15213 610 aaKnown RBP10.27□□□□□ -0.76
UBE3B-207ENST00000537063 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.76
UBE3B-207ENST00000537063 RPS12P25398 132 aaKnown RBP10.27□□□□□ -0.76
UBE3B-207ENST00000537063 KIF11P52732 1056 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 NELFCDQ8IXH7 590 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 NEK11Q8NG66 645 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 ARID3AQ99856 593 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 BHMT2Q9H2M3 363 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 ANKZF1Q9H8Y5 726 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 TYW1Q9NV66 732 aaKnown RBP10.27□□□□□ -0.76
UBE3B-207ENST00000537063 FBXO28Q9NVF7 368 aa10.27□□□□□ -0.76
UBE3B-207ENST00000537063 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 ADAM9Q13443 819 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 TEX35Q5T0J7 233 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 KIAA1328Q86T90 577 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 SAMD3Q8N6K7 520 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 CCDC155Q8N6L0 562 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 FIZ1Q96SL8 496 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 RIT2Q99578 217 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 MMRN2Q9H8L6 949 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 RGL1Q9NZL6 768 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 MYH11P35749 1972 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 SHTN1A0MZ66 631 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 MYBP10242 640 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 INPP5BP32019 993 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 CBX1P83916 185 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 CYP4A11Q02928 519 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 RAD51AP2Q09MP3 1159 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
UBE3B-207ENST00000537063 CCDC42Q96M95 316 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 PARD6BQ9BYG5 372 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 TFR2Q9UP52 801 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBE3B-207ENST00000537063 LTBP3Q9NS15 1303 aa10.27□□□□□ -0.77
UBE3B-207ENST00000537063 RSPH10B2B2RC85 870 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 CETN3O15182 167 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 TLR2O60603 784 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 RSPH10BP0C881 870 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 EIF4A3P38919 411 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 BMS1Q14692 1282 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 EPHA7Q15375 998 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 KRT222Q8N1A0 295 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 NEK9Q8TD19 979 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 SMCR8Q8TEV9 937 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 DYDC2Q96IM9 177 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 MXRA8Q9BRK3 442 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 UNC45AQ9H3U1 944 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 PCDHA13Q9Y5I0 950 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 NFKBIEO00221 500 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 CALUO43852 315 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 IPO7O95373 1038 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 ATP1A1P05023 1023 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 NR2F2P24468 414 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 BORCS6Q96GS4 357 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 ZNF341Q9BYN7 854 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 UBXN6Q9BZV1 441 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 PLCB1Q9NQ66 1216 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 WRAP73Q9P2S5 460 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 SEL1LQ9UBV2 794 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 COL11A1P12107 1806 aaPredicted RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 CCDC151A5D8V7 595 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 GAS7O60861 476 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 ARP10275 920 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 POLD1P28340 1107 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 CTTNQ14247 550 aaKnown RBP10.26□□□□□ -0.77
UBE3B-207ENST00000537063 RASA3Q14644 834 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 TNIP1Q15025 636 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 BRD3Q15059 726 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 SPA17Q15506 151 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 STRA6Q9BX79 667 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 EPC1Q9H2F5 836 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 AIPL1Q9NZN9 384 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 COL20A1Q9P218 1284 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 ODF2LQ9ULJ1 636 aa10.26□□□□□ -0.77
UBE3B-207ENST00000537063 TBCAO75347 108 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CYP27A1Q02318 531 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TNFAIP1Q13829 316 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 ZNF572Q7Z3I7 529 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 PRPF38AQ8NAV1 312 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 ZNF577Q9BSK1 485 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 LSM14BQ9BX40 385 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 IFIH1Q9BYX4 1025 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 SLC38A10Q9HBR0 1119 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms