RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CCDC65Q8IXS2 484 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CCDC150Q8NCX0 1101 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 VTI1AQ96AJ9 217 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 MRIQ9BWK5 157 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 TEKT3Q9BXF9 490 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 EPC1Q9H2F5 836 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 IGSF5Q9NSI5 407 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 TELO2Q9Y4R8 837 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CBFA2T2O43439 604 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 OSTNP61366 133 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 FKBP1AP62942 108 aaKnown RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 KCNA1Q09470 495 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 RAPGEF1Q13905 1077 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 RNF187Q5TA31 235 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 LRRC15Q8TF66 581 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 MKL1Q969V6 931 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 TSG101Q99816 390 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 HINFPQ9BQA5 517 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 WDR18Q9BV38 432 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 PLEKHA4Q9H4M7 779 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 LRP5O75197 1615 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CCL15-CCL14A0A0B4J2E2 113 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 KLK7P49862 253 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 APBA1Q02410 837 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CCL15Q16663 113 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 NAALADL2Q58DX5 795 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CCDC91Q7Z6B0 441 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 MCF2L2Q86YR7 1114 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 GMCL1P1Q8NEA9 526 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CEP170P1Q96L14 293 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 TEX13BQ9BXU2 312 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 FAM107BQ9H098 131 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 GABBR1Q9UBS5 961 aa9.06□□□□□ -0.96
ABCA4-207ENST00000536513 KIAA0100Q14667 2235 aaKnown RBP9.06□□□□□ -0.96
ABCA4-207ENST00000536513 CAVIN2O95810 425 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 SYTL5Q8TDW5 730 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 FGFBP2Q9BYJ0 223 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 CTIFO43310 598 aaKnown RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ICAM1P05362 532 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ITGB5P18084 799 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 CALRP27797 417 aaKnown RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 CASP14P31944 242 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ZNF280AP59817 542 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ANKRD40Q6AI12 368 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 PSMB7Q99436 277 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 TFR2Q9UP52 801 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 K7ENM7 598 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 KIF5CO60282 957 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 PEX3P56589 373 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ICE2Q659A1 982 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 CNNM4Q6P4Q7 775 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 C2orf69Q8N8R5 385 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 ZNF579Q8NAF0 562 aaKnown RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 CCDC97Q96F63 343 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 MMTAG2Q9BU76 263 aaKnown RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 TAF1DQ9H5J8 278 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 A1CFQ9NQ94 594 aaKnown RBP9.05□□□□□ -0.96
ABCA4-207ENST00000536513 TRPC6Q9Y210 931 aa9.05□□□□□ -0.96
ABCA4-207ENST00000536513 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 IQCA1LA6NCM1 817 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 LRRIQ4A6NIV6 560 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 TISP43B9A030 160 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 OPLAHO14841 1288 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SRGAP2CP0DJJ0 459 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 KRT9P35527 623 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 FKBP15Q5T1M5 1219 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 FBXO16Q8IX29 292 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 MYOCDQ8IZQ8 938 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 C4orf32Q8N8J7 132 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 LPAR1Q92633 364 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 RAD54LQ92698 747 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 COPS5Q92905 334 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SGSM3Q96HU1 749 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 CNOT6LQ96LI5 555 aaKnown RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 RUSC1Q9BVN2 902 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 KIAA1683Q9H0B3 1180 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 ASCC2Q9H1I8 757 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 UNC45AQ9H3U1 944 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 ACAD9Q9H845 621 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 HTRA3P83110 453 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 PPARDQ03181 441 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 TRAF1Q13077 416 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms