RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CT47A1Q5JQC4 288 aaPredicted RBP22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ABRAQ8N0Z2 381 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 KIAA0895Q8NCT3 520 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PPP1R9BQ96SB3 815 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 MPHOSPH6Q99547 160 aaKnown RBP22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SENP7Q9BQF6 1050 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 RUSC1Q9BVN2 902 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZSWIM4Q9H7M6 989 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SLC9A2Q9UBY0 812 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 STRNO43815 780 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ECM2O94769 699 aaPredicted RBP22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 QARSP47897 775 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 EHHADHQ08426 723 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 CYFIP1Q7L576 1253 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ADSSL1Q8N142 457 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ENOX1Q8TC92 643 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PANK4Q9NVE7 773 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FANCLQ9NW38 375 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 LOXHD1Q8IVV2 1947 aa22.64■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SYNRGQ9UMZ2 1314 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 KRT18P05783 430 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 UBA1P22314 1058 aaKnown RBP22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 COASYQ13057 564 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PAXIP1Q6ZW49 1069 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 MORC4Q8TE76 937 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 REEP2Q9BRK0 252 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SLC39A2Q9NP94 309 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 NFE2L3Q9Y4A8 694 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PCDHA10Q9Y5I2 948 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 DOCK3Q8IZD9 2030 aa22.63■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GIT2Q14161 759 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 CYP4F22Q6NT55 531 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 RINT1Q6NUQ1 792 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FBXO16Q8IX29 292 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 HHIPL1Q96JK4 782 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ATP1A3P13637 1013 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 MAPK4P31152 587 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ACTR2P61160 394 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GRB14Q14449 540 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 HSP90AA4PQ58FG1 418 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SMAP1Q8IYB5 467 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 RDM1Q8NG50 284 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TRIM5Q9C035 493 aa22.62■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ARIH2O95376 493 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TPM4P67936 248 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SREBF2Q12772 1141 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PAK1Q13153 545 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SARM1Q6SZW1 724 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ARMCX2Q7L311 632 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PLEKHH3Q7Z736 793 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GLIS3Q8NEA6 775 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 NELFBQ8WX92 580 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TLR2O60603 784 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PSMC5P62195 406 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 LY6KQ17RY6 165 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TRMT1LQ7Z2T5 733 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 CCDC65Q8IXS2 484 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 RWDD2AQ9UIY3 292 aa22.61■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PCNTO95613 3336 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 LOC102724159A0A0B4J2E5 919 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FRMD3A2A2Y4 597 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TMEM150BA6NC51 233 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ASB14A6NK59 587 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 LYPLA2O95372 231 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TGFB3P10600 412 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PMS1P54277 932 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PWP2Q15269 919 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 C17orf99Q6UX52 265 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ABHD15Q6UXT9 468 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 C1orf186Q6ZWK4 172 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 C4orf19Q8IY42 314 aa22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SAMSN1Q9NSI8 373 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-205ENST00000534885 RSPH10B2B2RC85 870 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FARP2O94887 1054 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 RSPH10BP0C881 870 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 YWHABP31946 246 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SPATA1Q5VX52 437 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 CCDC60Q8IWA6 550 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ZHX3Q9H4I2 956 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TBC1D7Q9P0N9 293 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GABBR1Q9UBS5 961 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TRIM49BA6NDI0 452 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PSAPP07602 524 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ZNF75DP51815 510 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 CRHR2Q13324 411 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 STIM1Q13586 685 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FAM26FQ5R3K3 315 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SWSAP1Q6NVH7 229 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 DPP9Q86TI2 863 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 SH2D3AQ9BRG2 576 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 FGFBP2Q9BYJ0 223 aa22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 MYH9P35579 1960 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ARHGEF35A5YM69 484 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PSMA7O14818 248 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 ZNF862O60290 1169 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 GGPS1O95749 300 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 TM4SF4P48230 202 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 PSMD2Q13200 908 aa22.58■■□□□ 1.21
TNFRSF1A-205ENST00000534885 HERC4Q5GLZ8 1057 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms