RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	RNF141	Q8WVD5	230 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	LIN37	Q96GY3	246 aa	Predicted RBP	7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	WNK4	Q96J92	1243 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	ZNF333	Q96JL9	665 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	CCDC74B	Q96LY2	380 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412		Q96M66	194 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	DEFB129	Q9H1M3	183 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	CWC25	Q9NXE8	425 aa	Predicted RBP	7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	DUSP13	Q9UII6	198 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	COL6A3	P12111	3177 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	ZNF804B	A4D1E1	1349 aa		7.76	□□□□□ -1.17
PICALM-223	ENST00000534412	HTR3B	O95264	441 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	PRKG1	Q13976	671 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	CWF19L2	Q2TBE0	894 aa	Known RBP	7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	KIAA0825	Q8IV33	1275 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	DTWD2	Q8NBA8	298 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	TTLL11	Q8NHH1	800 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	CD99L2	Q8TCZ2	262 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	PPP1R13L	Q8WUF5	828 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	CLMN	Q96JQ2	1002 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	MYD88	Q99836	296 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	GPR62	Q9BZJ7	368 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	PHAX	Q9H814	394 aa	Known RBP	7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	KBTBD4	Q9NVX7	518 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	TMEM59L	Q9UK28	342 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	FZD1	Q9UP38	647 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	IRS2	Q9Y4H2	1338 aa		7.75	□□□□□ -1.17
PICALM-223	ENST00000534412	ESR1	P03372	595 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	ZNF853	P0CG23	659 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	KLRK1	P26718	216 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	GBP1	P32455	592 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	HK2	P52789	917 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	JAG1	P78504	1218 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	SP3	Q02447	781 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	TTLL5	Q6EMB2	1281 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	OTUD7B	Q6GQQ9	843 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	REC114	Q7Z4M0	266 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	ABHD4	Q8TB40	342 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	PTPN18	Q99952	460 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	GREM2	Q9H772	168 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	C19orf73	Q9NVV2	129 aa		7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	KIAA0100	Q14667	2235 aa	Known RBP	7.74	□□□□□ -1.17
PICALM-223	ENST00000534412	DNAJC25-GNG10	A0A024R161	153 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	DBX1	A6NMT0	343 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	CHURC1-FNTB	B4DL54	471 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	IGKV5-2	P06315	115 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	ANKRD13A	Q8IZ07	590 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	CERS5	Q8N5B7	392 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	GIPC2	Q8TF65	315 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	MYLIP	Q8WY64	445 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	RUNDC1	Q96C34	613 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	PPP1R16B	Q96T49	567 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	ASPN	Q9BXN1	380 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	KRTAP9-9	Q9BYP9	154 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	KRTAP9-4	Q9BYQ2	154 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	LAS1L	Q9Y4W2	734 aa	Known RBP	7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	TRIOBP	Q9H2D6	2365 aa		7.73	□□□□□ -1.17
PICALM-223	ENST00000534412	CEP290	O15078	2479 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412		H0YGN5	161 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	TLR3	O15455	904 aa	Known RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	USP2	O75604	605 aa	Predicted RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	DDX58	O95786	925 aa	Known RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	FKBP1A	P62942	108 aa	Known RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	EGR3	Q06889	387 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	RALBP1	Q15311	655 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	DLGAP5	Q15398	846 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	CLEC16A	Q2KHT3	1053 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	SUPT20HL1	Q3ZLR7	823 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	SLC9C1	Q4G0N8	1177 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	RALGPS1	Q5JS13	557 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	C15orf52	Q6ZUT6	534 aa	Known RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	HS2ST1	Q7LGA3	356 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	CCDC146	Q8IYE0	955 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	KREMEN1	Q96MU8	473 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	PLA2G12B	Q9BX93	195 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	ANKRD2	Q9GZV1	360 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	CD209	Q9NNX6	404 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	IFT57	Q9NWB7	429 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	PTCH2	Q9Y6C5	1203 aa		7.72	□□□□□ -1.17
PICALM-223	ENST00000534412	WASH4P	A8MWX3	477 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	MYO1B	O43795	1136 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	SRF	P11831	508 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	EIF4A3	P38919	411 aa	Known RBP	7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	IGHMBP2	P38935	993 aa	Known RBP	7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	MESP2	Q0VG99	397 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	ARHGEF6	Q15052	776 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	GAB4	Q2WGN9	574 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	PRR23B	Q6ZRT6	265 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	ERMP1	Q7Z2K6	904 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	FBXO27	Q8NI29	283 aa		7.71	□□□□□ -1.18
PICALM-223	ENST00000534412	BRI3BP	Q8WY22	251 aa		7.71	□□□□□ -1.18

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