RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 LONRF2Q1L5Z9 754 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 KRT12Q99456 494 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 RIC8AQ9NPQ8 531 aa9.46□□□□□ -0.89
CTNND1-232ENST00000532649 ZBTB12Q9Y330 459 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-232ENST00000532649 BUB1O43683 1085 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 PHEXP78562 749 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 TBCCQ15814 346 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 SLC15A2Q16348 729 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 B4GALNT4Q76KP1 1039 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 VSIG1Q86XK7 387 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 IFT20Q8IY31 132 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 MAN1B1Q9UKM7 699 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 SYNJ2BP-COX16A0A087WUM0 186 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 F8W8V4 182 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 AFPP02771 609 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 MYL1P05976 194 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 NSFP46459 744 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 ARL6IP4Q66PJ3 421 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 PRPF38AQ8NAV1 312 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 LRGUKQ96M69 825 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 BHMT2Q9H2M3 363 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 COX16Q9P0S2 106 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 ABCD1P33897 745 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 DDIT3P35638 169 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 JAK3P52333 1124 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 DPCR1Q3MIW9 517 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 C1orf228Q6PIY5 440 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 CACTINQ8WUQ7 758 aaKnown RBP9.46□□□□□ -0.9
CTNND1-232ENST00000532649 TTC1Q99614 292 aa9.46□□□□□ -0.9
CTNND1-232ENST00000532649 A0A1B0GUA9 196 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 CSF1RP07333 972 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 IQCB1Q15051 598 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 PDCD2Q16342 344 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 ADGRF4Q8IZF3 695 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 ACRBPQ8NEB7 543 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 NSUN6Q8TEA1 469 aaKnown RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 KIAA1210Q9ULL0 1709 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 TTC4O95801 387 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 SRGAP2BP0DMP2 458 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 DPEP1P16444 411 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 FKBP3Q00688 224 aaKnown RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 NME8Q8N427 588 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 SLC13A4Q9UKG4 626 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 MAP3K7O43318 606 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 RNF8O76064 485 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 TRIM58Q8NG06 486 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 PIGOQ8TEQ8 1089 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 ZMAT2Q96NC0 199 aaKnown RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 SNX25Q9H3E2 840 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 RPAP3Q9H6T3 665 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 ELP3Q9H9T3 547 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 STK36Q9NRP7 1315 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 A0A087WWV3 80 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 NVLO15381 856 aaKnown RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 HMGCS2P54868 508 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 BPIFB4P59827 614 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 MMP19Q99542 508 aa9.45□□□□□ -0.9
CTNND1-232ENST00000532649 OSBPL5Q9H0X9 879 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-232ENST00000532649 KCNK3O14649 394 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 THAP12O43422 761 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 H2AFZP0C0S5 128 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 EEF1GP26641 437 aaKnown RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 C12orf60Q5U649 245 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD20A3Q5VUR7 823 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 H2AFVQ71UI9 128 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 N4BP2L2Q92802 583 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 DCCP43146 1447 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 NCOA3Q9Y6Q9 1424 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 ORC4O43929 436 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 TROVE2P10155 538 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PNMA8AQ86V59 439 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 GIMAP8Q8ND71 665 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-232ENST00000532649 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PAGE5Q96GU1 130 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 TEKT2Q9UIF3 430 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 POTEMA6NI47 508 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 K7ERI5 159 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 PSMD14O00487 310 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
CTNND1-232ENST00000532649 IFNB1P01574 187 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms